ggKbase home page

scnpilot_p_inoc_scaffold_49_183

Organism: SCNpilot_P_inoc_Xanthomonadales_65_14

near complete RP 52 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: comp(230662..231315)

Top 3 Functional Annotations

Value Algorithm Source
Probable chemoreceptor glutamine deamidase CheD {ECO:0000256|HAMAP-Rule:MF_01440}; EC=3.5.1.44 {ECO:0000256|HAMAP-Rule:MF_01440};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; similarity UNIPROT
DB: UniProtKB
  • Identity: 66.7
  • Coverage: 198.0
  • Bit_score: 274
  • Evalue 1.40e-70
Probable chemoreceptor glutamine deamidase CheD n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WBL5_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 66.7
  • Coverage: 198.0
  • Bit_score: 274
  • Evalue 9.90e-71
chemotaxis protein similarity KEGG
DB: KEGG
  • Identity: 64.6
  • Coverage: 198.0
  • Bit_score: 267
  • Evalue 2.60e-69

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 654
ATGCGTCTGGCGTCCGTCCCCGGCATCCAGCGAACCGGTGCGCGCGCGGTGGCGCGCGGGTTCGAACACCTGCTTCGCTTGCACGAAGCGGGCACGGGCCGGGTGTCGGTGAAGATCCTGCCCGGCGAGTATTACGCCACGGCGCAGGATGAAGTCATCACCACCGTGCTGGGCTCGTGCGTGTCGGCCTGCATCCACGACCCCGAAGCGAGGGTCGGCGGCATGAACCATTTCATGTTGCCCGAGCCTTCCGCCCGCCGCGGGCGCTGGGGCGACACCGCAGCCGGACGCTCGGCGCGTTACGGCAGCGACGCCATGGAACAACTGGTCAACACGGTGCTGAAGGCCGGTGGCGAACGCGGCCGGCTGCAGGTGAAGATTTTCGGTGGCGGGCGCGTCCTTGCGCGGATGACCGACATCGGCGCGCGCAACGTCGATTTCGTGCGCCGCTACCTCGACGCGGAATCGCTGCTGCTGGCGGCCGAGGACGTCGGCGGCGAGCGACCGCGCCAGGTCCGCTTCTATCCGGTGTCCGGGCGCGCGCAGGTGCGGCGCCTGAACGGCCTCGACGACGTCGGCCTCGCCGATCGCGAGCGCCGCTACCTCAAGCAACTCGCGAACGATCCGATAAAGGGTGAAGTGGAATTGTTTTGA
PROTEIN sequence
Length: 218
MRLASVPGIQRTGARAVARGFEHLLRLHEAGTGRVSVKILPGEYYATAQDEVITTVLGSCVSACIHDPEARVGGMNHFMLPEPSARRGRWGDTAAGRSARYGSDAMEQLVNTVLKAGGERGRLQVKIFGGGRVLARMTDIGARNVDFVRRYLDAESLLLAAEDVGGERPRQVRFYPVSGRAQVRRLNGLDDVGLADRERRYLKQLANDPIKGEVELF*