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scnpilot_p_inoc_scaffold_49_216

Organism: SCNpilot_P_inoc_Xanthomonadales_65_14

near complete RP 52 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: 264595..266001

Top 3 Functional Annotations

Value Algorithm Source
Sigma-54 interacting regulator n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VYD2_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 56.7
  • Coverage: 478.0
  • Bit_score: 498
  • Evalue 9.10e-138
  • rbh
Sigma-54 interacting regulator {ECO:0000313|EMBL:EIL92223.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanob similarity UNIPROT
DB: UniProtKB
  • Identity: 56.7
  • Coverage: 478.0
  • Bit_score: 498
  • Evalue 1.30e-137
Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 57.3
  • Coverage: 478.0
  • Bit_score: 489
  • Evalue 1.20e-135

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Taxonomy

Rhodanobacter fulvus → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1407
ATGCATGTGTTCCCGGTCTTGATCGTCGACTCCAACGCGACGCGCGCCTCCAGCATCTCCTCCTTCGTTGATGAAATCGGCTACCAGCCGCTGACCCACGCTCCCTCGAACGACGATTCCGACCCGTTGAACTGCTGCGCCGTGTACGTCGGCCCCGACGAACCGGCATCGGTGGTGAAAAGCCACCTCGCCATGCTCGGCGAATCACACCGCGATGCGCCACTGCTGGTGTCGGAGGATTCCCCGCATCTCGCGGCGTTGCGCCAACTCGCTGCGAACGTGTACCCGGTCGCGCCGCCGCACCTCGAATCGCTCGGCGCGATGCTGCGCCTGCACGCCCCGCGCACCGTCGGCAGCCGCACCACCGACGACCGCCGCTTCGTCGGCCGGTCGGAACCGGTGCGCCTGCTGCACAGCCTGATCCGGCGCGTGTCGCCGTTCGATTCCAGCGTGCTGGTGCTGGGCGAATCGGGCACCGGCAAGGAACTGGTCGCGCGCTTCATCCACGAATGCTCGCCGCGCCGCGACAAGCCCTTCATCGCGATCAATTGCGGCGCGATCCCGCCCGACCTGCTGGAAAGCGAATTGTTCGGCCACGAAAAGGGCGCGTTCACCGGCGCCATCAGCACCCGCAAGGGTCGTTTCGAAATGGCCGAAGGCGGCACCCTGCTGCTCGACGAAATCGGCGACATGAGCCTGCCGATGCAGGTGAAGCTGCTGCGCGTGCTGCAGGAACGCTGCTTCGAGCGCGTCGGCGGCAACAAGTCGATCCAGTGCGACGTGCGCATCATCGCCGCCACCCACAGGAACCTCGCGCAGGCCATCTTCGACGGCAAGTTCCGCGAGGACCTGTTCTACCGGCTCAACGTGTTCCCGGTGGAGTTGCCGCCATTGCGCGCACGCACCGAGGACCTGCTGGTGCTGATCGAGGAGTTCAACCAGCGCCTGGTGCGCCGCGGCCTCGCGCCGGCCCGCCTCACCGCCGACGCGCTCAACGCGTTGGCCGGCTACGACTGGCCCGGCAACGTGCGCGAGCTCGGCAACCTCATCGAGCGCCTCGCGATCCTGTACCCGGCAACGCCGGTGCGCGTTGCGGAACTGCCGCAGCAATACCGCAAGCAGCGCAAGTTCGACGAATCCGCCCCGCCCTCGTCGTTGCAGTGCATGCTCGACGGCAGCGGCGACGCCATCGATCTGGATGCCGGCGACGACCTCGACCAACTGCCCGAAGGCGGGCTCAACCTGCGCGACCATCTCGCCGACATCGAAGTCGGCCTGATCCGGCAGGCGCTGACCGCCTCCGATGGCGTGGTCGCGCACGCGGCCAAACTGCTCGGCATGCGCCGCACGACCCTGGTCGAAAAGCTGCGCAAGTACCAGCTGCAGGCCAACGTCACCGTGGAGTGA
PROTEIN sequence
Length: 469
MHVFPVLIVDSNATRASSISSFVDEIGYQPLTHAPSNDDSDPLNCCAVYVGPDEPASVVKSHLAMLGESHRDAPLLVSEDSPHLAALRQLAANVYPVAPPHLESLGAMLRLHAPRTVGSRTTDDRRFVGRSEPVRLLHSLIRRVSPFDSSVLVLGESGTGKELVARFIHECSPRRDKPFIAINCGAIPPDLLESELFGHEKGAFTGAISTRKGRFEMAEGGTLLLDEIGDMSLPMQVKLLRVLQERCFERVGGNKSIQCDVRIIAATHRNLAQAIFDGKFREDLFYRLNVFPVELPPLRARTEDLLVLIEEFNQRLVRRGLAPARLTADALNALAGYDWPGNVRELGNLIERLAILYPATPVRVAELPQQYRKQRKFDESAPPSSLQCMLDGSGDAIDLDAGDDLDQLPEGGLNLRDHLADIEVGLIRQALTASDGVVAHAAKLLGMRRTTLVEKLRKYQLQANVTVE*