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scnpilot_p_inoc_scaffold_49_239

Organism: SCNpilot_P_inoc_Xanthomonadales_65_14

near complete RP 52 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: 286056..286787

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma 70 n=1 Tax=Dyella japonica RepID=UPI00030577E5 similarity UNIREF
DB: UNIREF100
  • Identity: 72.1
  • Coverage: 244.0
  • Bit_score: 351
  • Evalue 7.20e-94
  • rbh
fliA; flagellar biosynthesis sigma factor similarity KEGG
DB: KEGG
  • Identity: 74.4
  • Coverage: 242.0
  • Bit_score: 354
  • Evalue 1.80e-95
RNA polymerase sigma factor FliA {ECO:0000256|HAMAP-Rule:MF_00962}; RNA polymerase sigma factor for flagellar operon {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma F {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma similarity UNIPROT
DB: UniProtKB
  • Identity: 74.4
  • Coverage: 242.0
  • Bit_score: 354
  • Evalue 9.10e-95

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Taxonomy

Dyella jiangningensis → Dyella → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 732
ATGAACGCGAGCGCCGAATACCTGCAGGTGCAGCGCCTGTCGGACGAAGAACTGGTGCGGGTGCACACGCCGCTGGTGCACCGCATCGCCTACCACCTGATGGCACGCCTGCCGCCGAGCGTGGACGTGCATGACCTGATCCAGTCGGGAATGATCGGCCTGCTGGAAGCGGCGAAAAATTTCACGCCGGGGCGCGCGGCGAGCTTCGAAACCTTCGCCGGCATCCGCATCCGCGGCGCGATGCTGGACGAACTTCGCAAGAGCGACTGGACGCCGCGCTCGGTGCACCGCAAGGTCCGCGAACTGACCGAAGCGACGCGCCAGGTGGAGTACGAAAGCGGCGGCGATGCCGATACCTCCGAAGTGATGCGAAGGATGGGCATCGACAGCAACGAATACAACCAGATCCTGGCGGACGCAGCGACTTCGCGGGTGCTGAGCCTGTCCGGTTCCGAAAACGAAGACGGCGCCGCCATGGACGTGGCCGACACCGCGAGCCTCGGCCCGGCCGAAGGCCTTGAAGACGGCGGGATGCGCGAGGCGCTGGCGGAGGCCATCGAGCAATTGCCGGAACGCGAAAAGCTGGTGATGTCGCTGTACTACGACGAGGAGTTGAACCTCAAGGAAATCGGCGCGGTGCTCGGCGTCAGCGAGTCCCGCGTCTGCCAGATCCACGGACAGGCGGTGGTCCGGCTGCGTGCGCGCATGCACGGCTGGTGCGACAACGAATGA
PROTEIN sequence
Length: 244
MNASAEYLQVQRLSDEELVRVHTPLVHRIAYHLMARLPPSVDVHDLIQSGMIGLLEAAKNFTPGRAASFETFAGIRIRGAMLDELRKSDWTPRSVHRKVRELTEATRQVEYESGGDADTSEVMRRMGIDSNEYNQILADAATSRVLSLSGSENEDGAAMDVADTASLGPAEGLEDGGMREALAEAIEQLPEREKLVMSLYYDEELNLKEIGAVLGVSESRVCQIHGQAVVRLRARMHGWCDNE*