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scnpilot_p_inoc_scaffold_49_249

Organism: SCNpilot_P_inoc_Xanthomonadales_65_14

near complete RP 52 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: 294281..295036

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XQ22_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 44.4
  • Coverage: 248.0
  • Bit_score: 178
  • Evalue 8.60e-42
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 44.7
  • Coverage: 235.0
  • Bit_score: 185
  • Evalue 1.50e-44
Uncharacterized protein {ECO:0000313|EMBL:AKC83602.1}; TaxID=1637999 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia.;" source="Verrucomicrobia bacterium IMCC26134.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.7
  • Coverage: 235.0
  • Bit_score: 185
  • Evalue 7.50e-44

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Taxonomy

Verrucomicrobia bacterium IMCC26134 → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 756
GTGCGTCACCAAAGGGACCACCCGCCGATCAACCCCCGATTCCCGGACACCAGTTGGGGGCTCGTGCTTGCAACTCGGGTTGACGCGAACGCCGGCAATGCCTTGGCCATCCTTTGTCGCCGTTACTGGCCACCCGTCTATGCGAGCCTGCGCCGGCAGGGGCTTCCTCCAGCGGATGCCGAGGATTTGACGCAGGGGTTCTTTCTTCATCTGATCGAGCGCGGCATCGCGGCGCGGGCAGACCCGCAGCGCGGACGGTTCCGTTCGTTCCTGTTCGGCAGCTTGCGCCGGTTTCTCGCCGACGATCGCGAGCGGGTACACGCACTGAAGCGCGGCGGCGACTCCGTTTGGGTGCCGATCGACGTCGCCGAAACCGAAGCAAGCCTGAATTTCGACGCCCGGAGCGGAGTGCCATTCGAACTGCAATTCGATCGGCAGTGGGCACGCACGGTCGTGAAGAACGCATTGGATGCATTGGGTACGGAATACACCGGACAGGGACAGACCCTCGAATACGAGACTCTGAGGCCGTGCCTGGATCCCGGTGCCGAGGCGCCCTCCTATGCAGCGCTGGCAAGGCATCTGGATCGCAGTGAAGGCGCGGTAAAGGTCGCCGTGCACCGGTTGCGGAAACGCTTTCGGGAAGCGCTCCGCGGAGAAATCGGCTGCACCGTGGCAACCGCAGGGGAAATCGAGGACGAACTGGCCTATCTGCGCAACGTGCTTGCCGTAAGTCCGACGATTGAACCGACATGA
PROTEIN sequence
Length: 252
VRHQRDHPPINPRFPDTSWGLVLATRVDANAGNALAILCRRYWPPVYASLRRQGLPPADAEDLTQGFFLHLIERGIAARADPQRGRFRSFLFGSLRRFLADDRERVHALKRGGDSVWVPIDVAETEASLNFDARSGVPFELQFDRQWARTVVKNALDALGTEYTGQGQTLEYETLRPCLDPGAEAPSYAALARHLDRSEGAVKVAVHRLRKRFREALRGEIGCTVATAGEIEDELAYLRNVLAVSPTIEPT*