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scnpilot_p_inoc_scaffold_46_176

Organism: SCNpilot_P_inoc_Xanthomonadales_65_14

near complete RP 52 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: 189430..189723

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-R similarity UNIPROT
DB: UniProtKB
  • Identity: 81.2
  • Coverage: 96.0
  • Bit_score: 158
  • Evalue 6.50e-36
DNA-directed RNA polymerase subunit omega n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8L3V3_FRAAD similarity UNIREF
DB: UNIREF100
  • Identity: 81.2
  • Coverage: 96.0
  • Bit_score: 158
  • Evalue 4.70e-36
DNA-directed RNA polymerase subunit omega similarity KEGG
DB: KEGG
  • Identity: 81.2
  • Coverage: 96.0
  • Bit_score: 158
  • Evalue 1.30e-36

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Taxonomy

Frateuria aurantia → Frateuria → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 294
ATGGCACGCATCACCGTCGAAGACTGCCTGCAGGTGGTCGACAACCGCTTCGAACTGGTCCTGATGGCTACCCGCCGCGCGCGTCAGCTCGAAAACGGGGTCGAACCCACCATCGCCCCCGAAAACGACAAACCCACCGTGCTGGCGCTGCGTGAAATCGCCGATCGCGCCATCGACATGCCGACCATCGACGAGATCGACCGCGTCGAGCGCGAGCGCCGCGATCGCGAGGCGATGGAATGGGCCGCGGCCGAAGTCGACGAAGACATGTCCAAGGGTCTCGACGACGTCTGA
PROTEIN sequence
Length: 98
MARITVEDCLQVVDNRFELVLMATRRARQLENGVEPTIAPENDKPTVLALREIADRAIDMPTIDEIDRVERERRDREAMEWAAAEVDEDMSKGLDDV*