ggKbase home page

scnpilot_p_inoc_scaffold_46_200

Organism: SCNpilot_P_inoc_Xanthomonadales_65_14

near complete RP 52 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: 217387..218109

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSW8_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 85.1
  • Coverage: 221.0
  • Bit_score: 381
  • Evalue 6.40e-103
ABC transporter {ECO:0000313|EMBL:EIM02560.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxyda similarity UNIPROT
DB: UniProtKB
  • Identity: 85.1
  • Coverage: 221.0
  • Bit_score: 381
  • Evalue 8.90e-103
ABC-type antimicrobial peptide transport system, ATPase component similarity KEGG
DB: KEGG
  • Identity: 83.1
  • Coverage: 225.0
  • Bit_score: 377
  • Evalue 3.40e-102

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 723
ATGAACGCTGCAGTCACTGAAGTGCAAGTCAACAACGGCCCGCTGGTGGAAATCCGGGGCGTCTCCAAGACCTACACGCGCGGCAAGCAGAAGCTGGAGGTGCTGCACCACATCGACCTCGACATCGCGCGCGGCGATTTCTTCGCGCTGATGGGACCTTCGGGCTCCGGCAAGACCACGCTGCTGAACCTGATCGGCGGCCTCGACTCGCCGACCGCCGGCTCGCTCGGCGTGGACGGCAAGCGTATCGACAGGATGGGCGAAAGCCAACTGGCGCGCTGGCGTGCCGGCAACGTCGGCTTCGTGTTCCAGTTCTACAACCTGATGCCGGGGCTGACCGCGCAGAGGAACGTGGAACTGCCGTTGCTGCTGACGAAGCTGTCGGCTTCGCAGCGCAGGAAGAATGCCGGGATTGCGCTGCAGCTGGTGGGGCTGGCCGACCGCGCTTCGCACAAGCCCGGTGAACTCTCGGGTGGCCAGCAGCAACGCGTCGCGATCGCACGCGCCATCGTATCCGACCCGACCCTGCTGGTCTGCGACGAACCGACCGGCGACCTCGACCGCCAATCGGCCGAGGAAGTCCTGGGGCTGTTGCAGAAACTCAACCGCGAACACGGCAAGACCATCGTGATGGTCACCCACGATCCCAAGGCGGCCGAGTACGCCTCGCACACACTGCATCTCGACAAGGGCACGCTGGTCGAAACACAGCACGCGGTTTGA
PROTEIN sequence
Length: 241
MNAAVTEVQVNNGPLVEIRGVSKTYTRGKQKLEVLHHIDLDIARGDFFALMGPSGSGKTTLLNLIGGLDSPTAGSLGVDGKRIDRMGESQLARWRAGNVGFVFQFYNLMPGLTAQRNVELPLLLTKLSASQRRKNAGIALQLVGLADRASHKPGELSGGQQQRVAIARAIVSDPTLLVCDEPTGDLDRQSAEEVLGLLQKLNREHGKTIVMVTHDPKAAEYASHTLHLDKGTLVETQHAV*