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scnpilot_p_inoc_scaffold_46_250

Organism: SCNpilot_P_inoc_Xanthomonadales_65_14

near complete RP 52 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: 275924..276871

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein LysR n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGQ0_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 56.4
  • Coverage: 312.0
  • Bit_score: 347
  • Evalue 1.70e-92
  • rbh
Regulatory protein LysR {ECO:0000313|EMBL:EIL98641.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter t similarity UNIPROT
DB: UniProtKB
  • Identity: 56.4
  • Coverage: 312.0
  • Bit_score: 347
  • Evalue 2.40e-92
h16_A1578; LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 42.8
  • Coverage: 299.0
  • Bit_score: 262
  • Evalue 2.10e-67

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 948
ATGGAATCGCCGCAGCAGAACCTCACCGACATCTTCTATTTCGTCCAGGTGGTCAGGCATGGAAGCCTCACCCGCGCCGCCCAGGAATTGGGGGTGGCCAAATCGCGGCTGAGCACGCGACTGGCGCGGCTGGAGCGCCAACTGGGCGTTCGCCTGATCCAGCGCACCACCCGGCGGCTGCACGTGACCGACGTCGGCCACAGCTATTTCGATCACTGCCGCGGCGTGCTGGAAGCGGCCGAGCGCGCGCAGGACGTCATCGACGATGCCAAGGCCGCGCCGCGCGGGAGGATCCGGGTCGCGGCGCCCTCATCGTTCGTGCAGATGCTGCTCGAGCCGATCCTGCTCGACTTCATGGAGCGCAATCCCGAGGTACAAATCGATCTGGATCCCGCGCGCCAGGAAGCCGGGGTCGTGGCCGATGGCCATGATGTCGTGTTCAGGGTCCGCACTTCACTGGAAGATTCCAGCATGGTCGCGCGCAGCTTCGGGCTGGACCCGCAAGTCCTGGTGGGTGCGCCGGCCTTGCTGAAACGCGTGGACGGTTTGCGCAGGCCTTCCGATCTGAAAAATCTTTCCAGCGTGGCCACGCCGCCGCCGCCGGCAGGCCGGCATTTCTGGTTGTTGAGGCATGCCGAGGGCGGTACCGAGACACAGGTGGAGCACCATCCACGCCTGGTCAGTGACGACCTGCTCCTGCTGCGGCGGGCGGCGATCGGCGGTGTCGGCATCGTGCAGCTCCCCGAGTTCATCTGCCGCGCCGGCCTGCAATCCGGAAGCCTGAAGCGCGTGCTGCCGAAATGGGAATTGCCGCCCGGCAACGTGCACGCCCTGTACCCGACCCGCCGCGGCCACACCCCGGCGCTGCGCAGCTTCATCGAGTACGTCGCCCTGCGCGTGCCGCAAGCGCTGGAGGACCTGCAACGACGCGCGCCGCACGCCGTCTGA
PROTEIN sequence
Length: 316
MESPQQNLTDIFYFVQVVRHGSLTRAAQELGVAKSRLSTRLARLERQLGVRLIQRTTRRLHVTDVGHSYFDHCRGVLEAAERAQDVIDDAKAAPRGRIRVAAPSSFVQMLLEPILLDFMERNPEVQIDLDPARQEAGVVADGHDVVFRVRTSLEDSSMVARSFGLDPQVLVGAPALLKRVDGLRRPSDLKNLSSVATPPPPAGRHFWLLRHAEGGTETQVEHHPRLVSDDLLLLRRAAIGGVGIVQLPEFICRAGLQSGSLKRVLPKWELPPGNVHALYPTRRGHTPALRSFIEYVALRVPQALEDLQRRAPHAV*