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scnpilot_p_inoc_scaffold_116_129

Organism: SCNpilot_P_inoc_Xanthomonadales_65_14

near complete RP 52 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: comp(130382..131335)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonad similarity UNIPROT
DB: UniProtKB
  • Identity: 66.0
  • Coverage: 315.0
  • Bit_score: 404
  • Evalue 1.00e-109
Pseudouridine synthase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WAJ2_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 66.0
  • Coverage: 315.0
  • Bit_score: 404
  • Evalue 7.10e-110
ribosomal large subunit pseudouridine synthase D similarity KEGG
DB: KEGG
  • Identity: 64.6
  • Coverage: 319.0
  • Bit_score: 403
  • Evalue 7.60e-110

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Taxonomy

Rhodanobacter sp. 115 → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 954
GTGACTGAACGATTCCGCAGCGAAGTCCCCGCCGACCTGGCCGGGCAACGCTTCGACCAGATCCTGCCGCAGTTGTTCCATGGCCATTCGCGCGCGCGCCTCGCCGCCGAGGTCAAGGCCGGGCGGATCACCCTGGATGGCCGGAAAACCGTGCCCCGCACGCTGGTGCGCGGCGGCGAGGCCGTGGAGTGGGAGCAGGCCGGGGAGCCGGCGCTGGATGATCGCCCCGAACCCATCGGGCTCGCCATCGTGCACGAGGATGCCGACCTGCTGGTGATCGACAAGCCGGCCGGGCTGGTGGTGCATCCCGGTGCGGGCAACCGCGACGGGACCCTGTTGAATGCGCTGCTGCACCACGATCCGGGCCTCGCGCGGGTGCCGCGCGCGGGCATCGTGCATCGCCTCGACAAGGACACCTCGGGCTTGCTGGTGGTGGCGCGTTCGCTGCCCGCGCATACCGCGCTGGTGGCGATGCTGGCGGCGCGCGACGTGCATCGCCGCTACGCCGCGATCGTCAACGGCGTGTCGGTGGCGGGGGGCAGCGTGGACGCACCGCTCGACCGGCATCCGTCCGATCGACTGCGGCGTGCGGTGCGCGAAGGCGGTCGACCTGCCGTCACGCACTACCGCGTGCGCGAGAAATTTCGCGCGCAGGCGTTGCTGCAATGCGAGCTGGAGTCCGGGCGCACCCATCAGATCCGCGTGCACATGGCGCACGCGGGCTATCCTCTCGTGGGCGATCCGTTGTACGGGAAGGGATTGAGGTTGCCGCGCGGCGCGATGCCGGAACTCGCGGAGGCGCTGCGCGGATTCAGGCGGCAGGCCCTGCACGCCGAGCACCTGGCGTTCGCGCATCCGGTTTCGGGCGAGGCATTGGCGTTCGATGCCGAGCCGCCGCGGGATTTCCTGGACCTATTGAACGCACTGCGCAAAGATGCCACCGCGAGGGATTGA
PROTEIN sequence
Length: 318
VTERFRSEVPADLAGQRFDQILPQLFHGHSRARLAAEVKAGRITLDGRKTVPRTLVRGGEAVEWEQAGEPALDDRPEPIGLAIVHEDADLLVIDKPAGLVVHPGAGNRDGTLLNALLHHDPGLARVPRAGIVHRLDKDTSGLLVVARSLPAHTALVAMLAARDVHRRYAAIVNGVSVAGGSVDAPLDRHPSDRLRRAVREGGRPAVTHYRVREKFRAQALLQCELESGRTHQIRVHMAHAGYPLVGDPLYGKGLRLPRGAMPELAEALRGFRRQALHAEHLAFAHPVSGEALAFDAEPPRDFLDLLNALRKDATARD*