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scnpilot_p_inoc_scaffold_175_11

Organism: SCNpilot_P_inoc_Xanthomonadales_65_14

near complete RP 52 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: comp(9009..9464)

Top 3 Functional Annotations

Value Algorithm Source
AraC family transcriptional regulator n=1 Tax=Rudaea cellulosilytica RepID=UPI000370A8A7 similarity UNIREF
DB: UNIREF100
  • Identity: 80.8
  • Coverage: 146.0
  • Bit_score: 235
  • Evalue 3.60e-59
AraC family transcriptional regulator {ECO:0000313|EMBL:EIL94632.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="R similarity UNIPROT
DB: UniProtKB
  • Identity: 77.9
  • Coverage: 145.0
  • Bit_score: 228
  • Evalue 6.10e-57
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 72.4
  • Coverage: 152.0
  • Bit_score: 225
  • Evalue 1.00e-56

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Taxonomy

Rhodanobacter sp. 115 → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 456
ATGGCCGGCAAACCGTCACCGACCCAGCTTCGCGACCTCGCGCGCCTGCGCCGCGTGCGCGACCGCATCGACCGCGAGTACGCCAAACCGCTGAATGTCGACGAATTGGCCCGCGGCGTGCACATGTCGTCCGGGCACCTGGGCCGCGAATTCAAGCGGGCCTTCGGCGAATCGCCTTACTCCTATCTGATGATGCGCCGCATCGAACGCGCCATGGCGCTGCTGCGGCGAGGCGATGTGGGCGTCACCGAAGCCTGCTTCGCGGTCGGCTGCGCCTCGCTCGGCACCTTCAGCACCCGCTTCACCGAACTGGTCGGCATGCCGCCCAGCGTCTACAAGCGCGAGGCGGCGCAGGTGACGGCCGGCATGCCGTCGTGCATCGCACGCCAGGTGACGCGGCCGGTCAGGACGCAACCGATCAGGAATGGAGAAGCGCGCGTCTCGGTTCGAACGTAG
PROTEIN sequence
Length: 152
MAGKPSPTQLRDLARLRRVRDRIDREYAKPLNVDELARGVHMSSGHLGREFKRAFGESPYSYLMMRRIERAMALLRRGDVGVTEACFAVGCASLGTFSTRFTELVGMPPSVYKREAAQVTAGMPSCIARQVTRPVRTQPIRNGEARVSVRT*