ggKbase home page

scnpilot_p_inoc_scaffold_175_30

Organism: SCNpilot_P_inoc_Xanthomonadales_65_14

near complete RP 52 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: 23761..24324

Top 3 Functional Annotations

Value Algorithm Source
Alginate regulatory protein AlgP n=1 Tax=Pseudomonas syringae BRIP39023 RepID=L7H1T4_PSESX similarity UNIREF
DB: UNIREF100
  • Identity: 35.6
  • Coverage: 188.0
  • Bit_score: 79
  • Evalue 5.30e-12
Transcriptional regulator {ECO:0000313|EMBL:KGU83811.1}; TaxID=1348058 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas med similarity UNIPROT
DB: UniProtKB
  • Identity: 37.0
  • Coverage: 173.0
  • Bit_score: 82
  • Evalue 6.70e-13
algR3; alginate regulatory protein AlgR3 similarity KEGG
DB: KEGG
  • Identity: 38.0
  • Coverage: 166.0
  • Bit_score: 78
  • Evalue 1.90e-12

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas mediterranea → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 564
ATGGTTACAAAACGGAACCACAAACCCGTGGGCAAGGCCGGCAAGAAAGTCCGCAAGGCGCCCGTCAAGTCCAAGGCCGGCAAGGCATCCGCGATTCGCAAGGCGGCCACGAAACCGGCCACGCGCGCGGCCGTGCGCAAGTCCCGCCCCGTCGCGAAGACGGCTTCCAGGTCCGTGGCCAAGCCTGCCACCGTGAAACAGGTCGCGGTCAAACCGGCTGCCGCAAAACCCGTGGCGCCTGCCAGATCGCCGCTTGCGCGGCCGGCATCGGTCAAGACCGCAGCCAAGGCGGTGGCGGCTGCGCGCGCCAATGCCAGACGGCGTGCGCCATCCTACATCCCCCGTTCCAGTTTCGGTGACGATTGGAAGATGGGCGGCCCGATCGAGTTGCCGCGCCAGCCGGCCCCGGCCGCGCATACGCCGACCCGCAAGCCGCCGAAACCGCGCGCGCCGAAGCCCAAGGCCATCAGCCATGAGCAGGCAGTCGCCAACTTGAAGGCGTTGCTGGAGTCGCGCAAGCGCAAGGATCGCGGTGGCGACGCGGGCGCGCCCAAGGGCGCCTGA
PROTEIN sequence
Length: 188
MVTKRNHKPVGKAGKKVRKAPVKSKAGKASAIRKAATKPATRAAVRKSRPVAKTASRSVAKPATVKQVAVKPAAAKPVAPARSPLARPASVKTAAKAVAAARANARRRAPSYIPRSSFGDDWKMGGPIELPRQPAPAAHTPTRKPPKPRAPKPKAISHEQAVANLKALLESRKRKDRGGDAGAPKGA*