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scnpilot_p_inoc_scaffold_575_28

Organism: SCNpilot_P_inoc_Xanthomonadales_65_14

near complete RP 52 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: 23728..24951

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma70 factor {ECO:0000313|EMBL:GAN45450.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugak similarity UNIPROT
DB: UniProtKB
  • Identity: 70.9
  • Coverage: 402.0
  • Bit_score: 540
  • Evalue 2.00e-150
Putative RNA polymerase, sigma-24 subunit, ECF subfamily id=4216382 bin=GWA2_Methylomirabilis_73_35 species=Leptolyngbya sp. PCC 6406 genus=Leptolyngbya taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 64.8
  • Coverage: 403.0
  • Bit_score: 494
  • Evalue 8.70e-137
  • rbh
putative RNA polymerase sigma factor containing a TPR repeat domain similarity KEGG
DB: KEGG
  • Identity: 62.0
  • Coverage: 403.0
  • Bit_score: 472
  • Evalue 1.70e-130

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Taxonomy

Mizugakiibacter sediminis → Mizugakiibacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1224
ATGAGCGAGGCCGCGCGGCTCGCGGTCGAGCGGGCGGCACGGGAAAGTTACGGCCGCCTGCTGGCCTTCCTCGCCGCGCGTTCGCGCGACATCGCCGCGGCCGAGGACGCGCTGGCCGACGCGTTCCATGCCGCGCTGGAAACCTGGCCGCGGGATGGCGTGCCCGACAAGCCGGAGGCCTGGCTGCTGACCGCGGCGCGGCGGCGCCTGATCGATGCCGCGCGGCGCGCGCACGTCCGGCACGCGGCCAGCGACGAACTGCAGCACGCGTTGGAACTCGCGCAGCACGATGCCGACGAGCCCGAGATGTTTCCCGATGAACGCCTGAAGCTGCTGTTCGTGTGCGCGCATCCGGCGATCGACGCGGCCGCGCGCACGCCGCTGATGCTGCAGACCGTGCTGGGACTCGACGCCGCGCGCATCGCCTCGGCGTTCCTGGTCAAGCCCGCCACGATGGGCCAGCGCCTGTCGCGCGCCAAGACCAAGATCCGCGACGCCGGCATCGCCTTCGCGGTACCGCGCACCGACGAATTGCCGGAACGCCTCGACGCGGTACTGGAGGCGATCTACGCCGCCTACGGCAGCGGATGGGACGACATCGCCGGCGCCGATCCGCGCCGCAAGGGCCTGGCCAATGAAGCGCTGGAACTCGGCGCGCTGCTGGCGCGGCTGCTGCCGGCCGAACCTGAAGCGTGTGGACTGCTGGCCCTGATGCTGTATTGCGAATCGCGCCGCGAGGCCCGCCGCGACGCAGCCGGCGGCTACGTGCCGCTGGACGAACAGGACACCACGGCGTGGTCGCAGCCGATGATCGAGGAAGCCGATCGCATGCTGGTTCGCGCGCAACGCGCGCGGCGGATCGGACGCTTCCAGCTGGAAGCCGCGATCCAGTCCGCGCATGCGGCACGACGGCACGCGGATCAAGTCGATTGGGAAGCGATCGCCTTGTTGTACGAGGGCCTCGCCCGCATCGCGCCGACCATCGGCGCACTGGTCGGCCGCGCCGCTGCGGTGGCCGAGGCACGCGACGCCGCGACGGGCCTCACCCTGTTGCAGTCCATCCCATCGAACGCGGTCGCGGGTTACCAACCCTACTGGGCGCTTGCCGCGCATTTGTTCGCGCGCCTTGGGCGGACCGATGACGCACACGCCGCGCGCGAACGCGCGATCGGGCTGTGCGAAGACCCGGCGATGCGTGCGTTTTTGCTGCGGCGGCAAAACTGA
PROTEIN sequence
Length: 408
MSEAARLAVERAARESYGRLLAFLAARSRDIAAAEDALADAFHAALETWPRDGVPDKPEAWLLTAARRRLIDAARRAHVRHAASDELQHALELAQHDADEPEMFPDERLKLLFVCAHPAIDAAARTPLMLQTVLGLDAARIASAFLVKPATMGQRLSRAKTKIRDAGIAFAVPRTDELPERLDAVLEAIYAAYGSGWDDIAGADPRRKGLANEALELGALLARLLPAEPEACGLLALMLYCESRREARRDAAGGYVPLDEQDTTAWSQPMIEEADRMLVRAQRARRIGRFQLEAAIQSAHAARRHADQVDWEAIALLYEGLARIAPTIGALVGRAAAVAEARDAATGLTLLQSIPSNAVAGYQPYWALAAHLFARLGRTDDAHAARERAIGLCEDPAMRAFLLRRQN*