ggKbase home page

scnpilot_p_inoc_scaffold_492

Search features with annotation key words

Displaying items 91-120 of 140 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_492_91
Flavobacterium sp. 316, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


92158..92610
DNA (453bp) protein (151aa)
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=1603293 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavoba
50S ribosomal protein L15 id=2532966 bin=GWF1_Flavobacteria_32_7 species=unknown genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF1_Flavobacteria_32_7 organism_group=Bacteroidetes
rplO; 50S ribosomal protein L15
scnpilot_p_inoc_scaffold_492_92
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


92624..93970
DNA (1347bp) protein (449aa)
Preprotein translocase subunit SecY n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6S8X6_9FLAO rbh
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae;
protein translocase subunit secY/sec61 alpha
scnpilot_p_inoc_scaffold_492_93
Flavobacterium aquatile, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

93976..94191
DNA (216bp) protein (72aa)
infA; translation initiation factor IF-1
Translation initiation factor IF-1 id=4226182 bin=GWA2_Flavobacterium_35_26 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=GWA2_Flavobacterium_35_26 organism_group=Bacteroidetes organism_desc=Good+ six scaffolds
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Fla
scnpilot_p_inoc_scaffold_492_94
Flavobacterium enshiense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


94322..94696
DNA (375bp) protein (125aa)
RpsM protein n=1 Tax=Flavobacterium enshiense DK69 RepID=V6S648_9FLAO
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1107311 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacteri
rpsM; 30S ribosomal protein S13
scnpilot_p_inoc_scaffold_492_95
Flavobacterium limnosediminis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


94708..95091
DNA (384bp) protein (128aa)
30S ribosomal protein S11 n=3 Tax=Flavobacterium RepID=V6S3M3_9FLAO
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1341181 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacteri
small subunit ribosomal protein S11
scnpilot_p_inoc_scaffold_492_96
unknown

Not on your lists

comp(95030..95149)
DNA (120bp) protein (40aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_492_97
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


95178..95783
DNA (606bp) protein (202aa)
30S ribosomal protein S4 n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6S2C6_9FLAO rbh
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacteriu
rpsD; 30S ribosomal protein S4
scnpilot_p_inoc_scaffold_492_98
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

95809..96801
DNA (993bp) protein (331aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase
rpoA; DNA-directed RNA polymerase alpha subunit RpoA (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha n=1 Tax=Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9) RepID=H8XSJ4_FLAIG rbh
scnpilot_p_inoc_scaffold_492_99
Flavobacterium limnosediminis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


96838..97323
DNA (486bp) protein (162aa)
RplQ protein n=3 Tax=Flavobacterium RepID=V6S358_9FLAO rbh
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=1341181 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavoba
rplQ; 50S ribosomal protein L17
scnpilot_p_inoc_scaffold_492_100
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

97516..98625
DNA (1110bp) protein (370aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_012
carA; Carbamoyl-phosphate synthase small subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthetase, small subunit n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6S3L8_9FLAO rbh
scnpilot_p_inoc_scaffold_492_101
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

98676..99968
DNA (1293bp) protein (431aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000
eno; Phosphopyruvate hydratase (EC:4.2.1.11)
Phosphopyruvate hydratase n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6S2C0_9FLAO rbh
scnpilot_p_inoc_scaffold_492_102
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

100261..101544
DNA (1284bp) protein (428aa)
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369, ECO:0000256|RuleBase:RU003370}; EC=2.3.3.16 {ECO:0000256|RuleBase:RU003370};; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobact
gltA; citrate (Si)-synthase (EC:2.3.3.1)
Citrate (Si)-synthase n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6S2F9_9FLAO rbh
scnpilot_p_inoc_scaffold_492_103
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(101603..101974)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6S3L3_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ESU20842.1}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cau
hypothetical protein
scnpilot_p_inoc_scaffold_492_104
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

102166..103080
DNA (915bp) protein (305aa)
Amidinotransferase family protein n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6S2B5_9FLAO rbh
Amidinotransferase family protein {ECO:0000313|EMBL:ESU20841.1}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobac
Amidinotransferase family protein
scnpilot_p_inoc_scaffold_492_105
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

103102..104040
DNA (939bp) protein (313aa)
Pentein-type domain-containing protein n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SA57_9FLAO rbh
Pentein-type domain-containing protein {ECO:0000313|EMBL:ESU23563.1}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Fla
hypothetical protein
scnpilot_p_inoc_scaffold_492_106
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(104105..105007)
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Flavobacterium sp. F52 RepID=J1KVS0_9FLAO rbh
Uncharacterized protein {ECO:0000313|EMBL:KFF18192.1}; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis
hypothetical protein
scnpilot_p_inoc_scaffold_492_107
Joostella marina, Joostella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

105417..107546
DNA (2130bp) protein (710aa)
Outer membrane cobalamin receptor protein n=1 Tax=Joostella marina DSM 19592 RepID=I3C838_9FLAO rbh
TonB-dependent Receptor
Outer membrane cobalamin receptor protein {ECO:0000313|EMBL:EIJ39781.1}; Flags: Precursor;; TaxID=926559 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Joostell
scnpilot_p_inoc_scaffold_492_108
Tamlana nanhaiensis, Tamlana, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

107551..108954
DNA (1404bp) protein (468aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI00038029F9 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJD31083.1}; TaxID=1382798 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Tamlana.;" source="Tamlana nanhaiensis.;"
hypothetical protein rbh
scnpilot_p_inoc_scaffold_492_109
Tamlana nanhaiensis, Tamlana, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

108972..110231
DNA (1260bp) protein (420aa)
Putative uncharacterized protein n=1 Tax=unidentified eubacterium SCB49 RepID=A6ELW3_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:KJD31082.1}; TaxID=1382798 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Tamlana.;" source="Tamlana nanhaiensis.;"
uncharacterized protein
scnpilot_p_inoc_scaffold_492_110
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(110314..110943)
DNA (630bp) protein (210aa)
Multiple antibiotic resistance (MarC)-like protein n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6S2F4_9FLAO rbh
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium
multiple antibiotic resistance (MarC)-like protein
scnpilot_p_inoc_scaffold_492_111
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

111093..111449
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9) RepID=H8XSP9_FLAIG
CoA-binding protein {ECO:0000313|EMBL:KGO89366.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheo
hypothetical protein
scnpilot_p_inoc_scaffold_492_112
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(111446..112951)
DNA (1506bp) protein (502aa)
Sodium/iodide co-transporter n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FMP7_9FLAO rbh
Sodium:solute symporter {ECO:0000313|EMBL:KGO84276.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium bei
Sodium:solute symporter
scnpilot_p_inoc_scaffold_492_113
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

113104..113682
DNA (579bp) protein (193aa)
RecR protein n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SA52_9FLAO rbh
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavob
recR; recombination protein RecR
scnpilot_p_inoc_scaffold_492_114
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

113778..114575
DNA (798bp) protein (266aa)
Polysaccharide exporter n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SBD1_9FLAO rbh
Polysaccharide exporter {ECO:0000313|EMBL:ESU23557.1}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sal
sugar transporter
scnpilot_p_inoc_scaffold_492_115
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

114581..117037
DNA (2457bp) protein (819aa)
Tyrosine-protein kinase involved in exopolysaccharide biosynthesis n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SA81_9FLAO rbh
Tyrosine-protein kinase involved in exopolysaccharide biosynthesis {ECO:0000313|EMBL:ESU23556.1}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; F
sugar transporter
scnpilot_p_inoc_scaffold_492_116
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

117037..117909
DNA (873bp) protein (291aa)
O-antigen export system, permease protein n=1 Tax=Formosa sp. AK20 RepID=M7NAH7_9FLAO rbh
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1250005 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp
ABC-2 type transporter
scnpilot_p_inoc_scaffold_492_117
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

118055..119446
DNA (1392bp) protein (464aa)
UDP-glucose 6-dehydrogenase {ECO:0000313|EMBL:ESU20831.1}; EC=1.1.1.22 {ECO:0000313|EMBL:ESU20831.1};; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriace
ugd; UDP-glucose 6-dehydrogenase (EC:1.1.1.22)
UDP-glucose 6-dehydrogenase n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6S2A6_9FLAO rbh
scnpilot_p_inoc_scaffold_492_118
RLO_Flavobacteria_35_11, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

119595..120125
DNA (531bp) protein (177aa)
PaaX family transcriptional regulator n=1 Tax=Imtechella halotolerans K1 RepID=I0W6K0_9FLAO
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_35_11_curated
hypothetical protein
scnpilot_p_inoc_scaffold_492_119
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

120209..121177
DNA (969bp) protein (323aa)
UDP-glucose 4-epimerase (EC:5.1.3.2)
NAD-dependent epimerase/dehydratase n=1 Tax=Flavobacterium sp. F52 RepID=J1KVE2_9FLAO rbh
Epimerase {ECO:0000313|EMBL:KFC59340.1}; TaxID=1492737 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
scnpilot_p_inoc_scaffold_492_120
Flavobacterium sp. 316, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

121194..122471
DNA (1278bp) protein (426aa)
WbpO protein n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SL10_9FLAO rbh
UDP-N-acetyl-D-galactosamine dehydrogenase {ECO:0000313|EMBL:KIX19802.1}; TaxID=1603293 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source=
UDP-N-acetyl-D-galactosamine dehydrogenase
Displaying items 91-120 of 140 in total

View Taxonomy