ggKbase home page

scnpilot_p_inoc_scaffold_71_54

Organism: SCNpilot_P_inoc_Flavobacterium_40_86

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 15 / 38 MC: 1
Location: comp(67958..68566)

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS0 similarity UNIPROT
DB: UniProtKB
  • Identity: 57.3
  • Coverage: 199.0
  • Bit_score: 221
  • Evalue 1.00e-54
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI00035E8B59 similarity UNIREF
DB: UNIREF100
  • Identity: 62.2
  • Coverage: 201.0
  • Bit_score: 262
  • Evalue 2.80e-67
peptide deformylase similarity KEGG
DB: KEGG
  • Identity: 54.6
  • Coverage: 194.0
  • Bit_score: 210
  • Evalue 3.50e-52

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedobacter sp. NL19 → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 609
ATGACGGTCACAGCACAAAATTTTACCAAAACAGAAAAAGAAATAATCCATTCCGGAAATACCAAAAGCAAACTGAGAGTGATTCAGATTACGGAACCGGCAGAATTAAAAATACTAAAAACCGTTTCCCGGGATATCAGCCCAAACGATAAAGACTTACCACTTTTGATTGAGAGAATGTTCAAAGCGGTTACCGATCCGTCCGAAGGCGGTGTGGGTATTGCAGCACCGCAGGTTGGCATCAATCGAAATGTGATCTGGGTACAGCGGTTTGACAAACAGAATGAACCGTTTGAAGTGTATATCAACCCGCAAATTGTATGGCGCTCCGAACTGTTGCGCAAAGGAAACGAAGGTTGCCTGTCTATTCCGGACAGTAGCGGCGACGTATATCGGAATTATACAATACGATTAAAATACCTTGACAGGGAAGGAAAGGCTCAGGAAGAAATCATTGAAGGATTTACGGCAGTTATCTTTCAGCATGAAACAGATCACCTGAACGGTATTTTGTTTACGGACCGATTACTGGAACAAAATAATGTGCAGTTTCACAGTATTAATAACGAAACAGCGCTTTTCTTGCAAACCAAACTCAGAAGACAATAA
PROTEIN sequence
Length: 203
MTVTAQNFTKTEKEIIHSGNTKSKLRVIQITEPAELKILKTVSRDISPNDKDLPLLIERMFKAVTDPSEGGVGIAAPQVGINRNVIWVQRFDKQNEPFEVYINPQIVWRSELLRKGNEGCLSIPDSSGDVYRNYTIRLKYLDREGKAQEEIIEGFTAVIFQHETDHLNGILFTDRLLEQNNVQFHSINNETALFLQTKLRRQ*