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scnpilot_p_inoc_scaffold_71_207

Organism: SCNpilot_P_inoc_Flavobacterium_40_86

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 15 / 38 MC: 1
Location: 210438..211853

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein GntR HTH n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XUX8_PEDHD similarity UNIREF
DB: UNIREF100
  • Identity: 80.0
  • Coverage: 471.0
  • Bit_score: 799
  • Evalue 2.50e-228
  • rbh
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 80.0
  • Coverage: 471.0
  • Bit_score: 799
  • Evalue 7.10e-229
  • rbh
Regulatory protein GntR HTH {ECO:0000313|EMBL:ACU05986.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter he similarity UNIPROT
DB: UniProtKB
  • Identity: 80.0
  • Coverage: 471.0
  • Bit_score: 799
  • Evalue 3.50e-228

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Taxonomy

Pedobacter heparinus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1416
ATGCCGAAAGAAGCCTTATATCAAAAAATTGCCCATACTGTTGAAGCCCAGATTGCTTCCGAAACATTAAAAATTGGCGATAAACTGCCTTCTATCCGCACGGTACAAAAAATTTACAATGTCAGTCTAAACACTGTAAAGCAGGCTTTTCTGGAACTGGAAAGCAAATCACTGATAGAATCCCGGCCAAAATCGGGTTATTATGTGAGCAATACCTTTAACCGGAAATTTTCCATTCCGGAAACCAGTAAACCCAGGCTGTTTGAAAAAGAGGATCATCCGGAAGATTTAATCAGCAAGGTTTTTAATACCCTGCATCACAAAGAAATTACCCAGTTTTCACTGGGTGTACCGGACAACAGTATGCTGCCCATTGCCAAACTGAATAAAAGTGTCCTGAAAGCGATGCGAAGTCTGGACGACAGCGGAACCGGATATGATATTATTCCCGGCAATACAAACCTCCGGCGCAATATTTCAAAATGGTCTTTTGTGTGGGGCGGTTCGCTAACGGAAAACGATATTATAACCACTTCCGGCACGCTGAATGCTATTTACTTATGCCTGATGGCGGTTACCAAACCGGGAGATACGATTGCACTGGAAAGCCCGATCTATTTTGGCATACTGCAAATGATACAATCCCTCGGACTAAAAGTCATTGAGCTGCCTACCAATCCGGTAACCGGCATTGATGTGGATGCACTTAAAAAAGTGTTACCCAAAATACAGGCCTGCTGCCTGGTAAGCAATTTCAATAACCCGCTAGGCAGCTGTATGCCGGACGAGAACAAAAAAGCCGTAGTCAAAATGCTTACCGAATACAATATTCCGCTAATTGAGGATGATTTATACGGAGATCTGTTTTTTGGCACCAGCCGCCCTGCTCCCTGCAAACTGTATGACGAAGCGGGTATCGTTATGTGGTGCGGTTCTTTTTCGAAAACCCTGGCACCCGGCTACCGGGTTGGCTGGGTAGCCCCCGGAAAGTTTAAAGAAAAAGTGATGCGGAAAAAACTGTTGCAAACCATATCCACACCGCCTTTATTTCAGGAGGTTGTAGCCGATTTTATGGAACATGGCCGGTATGACCTTCACCTTCGCAACCTGAGAAATACGCTGCACACCAATTGCCTGCAATACCAGCGGGCTATTGAAACCTATTTCCCGGATAATACCAAAGCCGCACAGCCACAGGGTGGTTTTGTATTGTGGCTGGAACTGGACAAACGTATCGATACCGCTCTGCTGTATGAACAGGCAATGCAGCAGAATATCAGCTTTGCACCCGGCAGAATGTTCACGCAGCACAACCAGTTTAATAACTGTATGCGGCTGAATTTTGCCCTAAAATGGGATGAAAAACTGGAATATGATTTGAAACGCCTCGGGAATATCGTGAAGAAAGCATTGTAA
PROTEIN sequence
Length: 472
MPKEALYQKIAHTVEAQIASETLKIGDKLPSIRTVQKIYNVSLNTVKQAFLELESKSLIESRPKSGYYVSNTFNRKFSIPETSKPRLFEKEDHPEDLISKVFNTLHHKEITQFSLGVPDNSMLPIAKLNKSVLKAMRSLDDSGTGYDIIPGNTNLRRNISKWSFVWGGSLTENDIITTSGTLNAIYLCLMAVTKPGDTIALESPIYFGILQMIQSLGLKVIELPTNPVTGIDVDALKKVLPKIQACCLVSNFNNPLGSCMPDENKKAVVKMLTEYNIPLIEDDLYGDLFFGTSRPAPCKLYDEAGIVMWCGSFSKTLAPGYRVGWVAPGKFKEKVMRKKLLQTISTPPLFQEVVADFMEHGRYDLHLRNLRNTLHTNCLQYQRAIETYFPDNTKAAQPQGGFVLWLELDKRIDTALLYEQAMQQNISFAPGRMFTQHNQFNNCMRLNFALKWDEKLEYDLKRLGNIVKKAL*