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scnpilot_p_inoc_scaffold_87_50

Organism: SCNpilot_P_inoc_Flavobacterium_40_86

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 15 / 38 MC: 1
Location: comp(50033..50890)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AraC family n=1 Tax=Muricauda ruestringensis (strain DSM 13258 / LMG 19739 / B1) RepID=G2PSH1_MURRD similarity UNIREF
DB: UNIREF100
  • Identity: 63.5
  • Coverage: 277.0
  • Bit_score: 388
  • Evalue 6.20e-105
Contig_46, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ18049.1}; TaxID=1587524 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="F similarity UNIPROT
DB: UniProtKB
  • Identity: 64.9
  • Coverage: 282.0
  • Bit_score: 397
  • Evalue 1.40e-107
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 63.5
  • Coverage: 277.0
  • Bit_score: 388
  • Evalue 1.70e-105

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Taxonomy

Flavobacterium sp. MEB061 → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 858
ATGAAAACACAGGAAGACATTCATTTTGACCGTATTGCAAAGGCCATCACATTTTTGCAGGGCAATTTTAAGACTCAGCCCACTTTGGATGAAGTGGCGGCTTATGTACATTTAAGTCCTTTTCATTTCCAGAAAATGTTTACGGAATGGGCAGGCGTGAGTCCGAAAAAATTTCTACAGTATTTAACGGTCGAACACGCCAAAAAAATGCTGAAAAACAACCAGTTTACCTTGTCGGAAACGGCTTTTGAAACCGGGCTTTCCGGAACGGGCAGGCTGCACGATTTGTTTGTGAATATTGAAGGGATGACCCCGGGTGATTATAAAAACGGAGGGGCTTTTCTGAGCATCAATTATAGTTTTGAAGAAAGTCCGTTTGGTTTGCTGCTGATCGCATCAACAGCCAAAGGAATCTGTCATGTGGCTTTTGCCGATAATCCGGAAAGTTCGTTACAGGATATGAAACATACTTTTCCGAATGCTGTTTATACCGAGGCTTCCGATTCGTTTCAAAAAGGGATCATGACGTTTTTCAGAAAAGACTGGACAGCGCCTCACCAGCTGAAATTGCATCTGAAAGGAACTGATTTTCAGCTGAAAGTATGGGAAACACTGCTAAAAGTACCAATGGGGCAACTGGTTACTTATGGCGATATTGCCAGAGCGATTAACCGTCCGAAAGCTTCGAGAGCAGTAGGTACGGCTATTGGAAACAATCCGGTGGCATTTTTGATTCCCTGCCACCGCGTGATACAGGCTACCGGAGTGATAGGAGAGTACCATTGGGGCAGTGCCCGTAAAAAAGCGATCATCGGCTGGGAAGCCTGTCAGGCAGATACCCTTATAAGTGAATCGTAA
PROTEIN sequence
Length: 286
MKTQEDIHFDRIAKAITFLQGNFKTQPTLDEVAAYVHLSPFHFQKMFTEWAGVSPKKFLQYLTVEHAKKMLKNNQFTLSETAFETGLSGTGRLHDLFVNIEGMTPGDYKNGGAFLSINYSFEESPFGLLLIASTAKGICHVAFADNPESSLQDMKHTFPNAVYTEASDSFQKGIMTFFRKDWTAPHQLKLHLKGTDFQLKVWETLLKVPMGQLVTYGDIARAINRPKASRAVGTAIGNNPVAFLIPCHRVIQATGVIGEYHWGSARKKAIIGWEACQADTLISES*