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scnpilot_p_inoc_scaffold_87_57

Organism: SCNpilot_P_inoc_Flavobacterium_40_86

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 15 / 38 MC: 1
Location: 56934..57464

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6S272_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 93.8
  • Coverage: 176.0
  • Bit_score: 339
  • Evalue 2.00e-90
  • rbh
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacteri similarity UNIPROT
DB: UniProtKB
  • Identity: 93.8
  • Coverage: 176.0
  • Bit_score: 339
  • Evalue 2.90e-90
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 81.2
  • Coverage: 176.0
  • Bit_score: 298
  • Evalue 1.50e-78

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Taxonomy

Flavobacterium cauense → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 531
ATGACTCAAGAAGAATTATTGCCACAAATCTACAAAAAAGACGACAAAGCGTTCACTCTTTTGTATGATATGTATGCCAAAAGTCTCTACGGCATCATTTATAATCTGATAAAAGACCGGGAAGAGGCAGAAGATGTCCTTCAGGAAACCTTTGTGAAGATCTGGAAAAATATGGACAGCTATAATGAAAGTAAAGGGCGTTTTTTTACCTGGATTCTCAACATAGCCCGTAATACCGCTATCGACAAATTACGTTCTAAAAACTTTAACAATAATCAGAAAAACTTATCTTCTGACAATTTCGTACATATACTCGATGACAGTTCGAAAACAAATAACAAAATTGATACTATTGGAATTCAGGAGTTTGTCAAAAAACTAAAGCCAAAATGCATCCAGCTGATTGATTTGCTGTTTTTTAAAGGCTACACCCAGCAGGAAGCATCCGAAGAACTGGAAATACCTTTGGGTACGGTTAAAACGCAGAACAGAAATTGTATTAATGAATTAAGAAACTTACTTGGAGTATAA
PROTEIN sequence
Length: 177
MTQEELLPQIYKKDDKAFTLLYDMYAKSLYGIIYNLIKDREEAEDVLQETFVKIWKNMDSYNESKGRFFTWILNIARNTAIDKLRSKNFNNNQKNLSSDNFVHILDDSSKTNNKIDTIGIQEFVKKLKPKCIQLIDLLFFKGYTQQEASEELEIPLGTVKTQNRNCINELRNLLGV*