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scnpilot_p_inoc_scaffold_135_162

Organism: SCNpilot_P_inoc_Flavobacterium_40_86

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 15 / 38 MC: 1
Location: 180988..182088

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein {ECO:0000313|EMBL:KFF00209.1}; TaxID=236814 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium similarity UNIPROT
DB: UniProtKB
  • Identity: 39.9
  • Coverage: 373.0
  • Bit_score: 245
  • Evalue 8.90e-62
RNA polymerase sigma-70 factor, ECF subfamily id=1882220 bin=GWE2_Bacteroidetes_29_8 species=Formosa sp. AK20 genus=Formosa taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_29_8 organism_group=Bacteroidetes organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 43.2
  • Coverage: 169.0
  • Bit_score: 123
  • Evalue 4.80e-25
RNA polymerase similarity KEGG
DB: KEGG
  • Identity: 36.9
  • Coverage: 176.0
  • Bit_score: 118
  • Evalue 3.30e-24

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Taxonomy

Chryseobacterium formosense → Chryseobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1101
ATGGCAACCTTCAACTGGAATGAAATTTACATCAGCACATCCCCAAAATTACTGGGGATTTGTCGCAGGTATATAAAAGATCTTGCCACTGCCGAAGATATTATACAGGATTCTTTTATTGTAGCGATCCAAAAGGAAAACACGCTGAAAGACGCAAACGCTTTAAATGGCTGGTTAAGCAGAATTGTGATTAACATGGCTATCCATCATTTAAAAGAGACCAAAAAAATAAACTTCTCAACCGATCAGGACTGTGAAATTGTTGATTCAACTACCCTTATGAATACCTTAGAAACCGATATCAAAAGCATCCTTCTGACTTCTGATTTAGAAAAAAATGACATCTTAGAAGCAATCGATCAATTGCCGGAACATCATAAATCCGTTTTTAACCTATATGTCATCGACCAGTTTTCGCATAGTGAAATTGGCAAAATACTCCATATCTCAACCGGCACTTCAAAATCACATCTGTCCAGAGCCCGGAAAGCGATTCAGGCATTTTTACTCGAAAAAATACAGGGAAAACCGGTTGACAAGAAAAAGAAACGCCGCATTGCTTTTTTACTTTTCCTGGGATTCGGAAACCAGATGTTTGCCAATTATTGCCAAAAACAGTTCCGGGATTTTGAAATAAAACCACAGAAAAAATTAGAATTAAATCCGGAAAAATCACTCATTCCAAACGAGTTTATCGGTTTACCTAAAATAGCTTCCGCATCAAGGACCATAGCTGCAAGCATTGTTTTATCGGGGATAATCGGGGTTATTTTTTATGCTTATACCTACAACCATAAAACTATTTCACCAAAAAATGAACCGGAATCCAATATGAAACCGGTAAAAAACACCACTACAGATCAATTACTGGTAAACACAACAGATTCCGTACAAAACAAAACTACCAACACTCCAAAACCAGATAAAACGGAAGCGGTTTCCACTCCGGAAAAAGCAACGGTTTTGAAAAATAATGCTCCGAATACTACGGCAAACCCAATAGTTACAACACAAAAAGATTCGATAAAAGAAGAACCTCAAAAAGTAGTTGTCATTAAGAAACAAATTGTAAAAAAAGACACTATTTATGTTACGAGATAA
PROTEIN sequence
Length: 367
MATFNWNEIYISTSPKLLGICRRYIKDLATAEDIIQDSFIVAIQKENTLKDANALNGWLSRIVINMAIHHLKETKKINFSTDQDCEIVDSTTLMNTLETDIKSILLTSDLEKNDILEAIDQLPEHHKSVFNLYVIDQFSHSEIGKILHISTGTSKSHLSRARKAIQAFLLEKIQGKPVDKKKKRRIAFLLFLGFGNQMFANYCQKQFRDFEIKPQKKLELNPEKSLIPNEFIGLPKIASASRTIAASIVLSGIIGVIFYAYTYNHKTISPKNEPESNMKPVKNTTTDQLLVNTTDSVQNKTTNTPKPDKTEAVSTPEKATVLKNNAPNTTANPIVTTQKDSIKEEPQKVVVIKKQIVKKDTIYVTR*