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scnpilot_p_inoc_scaffold_307_46

Organism: SCNpilot_P_inoc_Flavobacterium_40_86

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 15 / 38 MC: 1
Location: comp(46956..47150)

Top 3 Functional Annotations

Value Algorithm Source
cold-shock protein n=1 Tax=Empedobacter brevis RepID=UPI00037479F3 similarity UNIREF
DB: UNIREF100
  • Identity: 65.1
  • Coverage: 63.0
  • Bit_score: 87
  • Evalue 5.10e-15
cold-shock DNA-binding domain-containing protein; K03704 cold shock protein (beta-ribbon, CspA family) Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 65.6
  • Coverage: 64.0
  • Bit_score: 91
  • Evalue 3.80e-16
cold shock protein similarity KEGG
DB: KEGG
  • Identity: 65.1
  • Coverage: 63.0
  • Bit_score: 87
  • Evalue 1.40e-15

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Taxonomy

RIFOXYD2_FULL_Sphingobacteria_35_12_curated → Sphingobacteria → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 195
ATGATTACAGGTACAGTAAAATTTTTCAATGAAGAAAAAGGGTATGGATTCATCAAACACGATGATGAGAATAAAGAATGCTTTGTACACTCTACAGGGTTAATTGACCGTATTAAAGAAGATGACAAAGTATCCTTCACAGTCGAAACCGGTAAAAAAGGACCAACGGCAACTAATGTAAAACTAATTAACTAG
PROTEIN sequence
Length: 65
MITGTVKFFNEEKGYGFIKHDDENKECFVHSTGLIDRIKEDDKVSFTVETGKKGPTATNVKLIN*