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scnpilot_p_inoc_scaffold_307_49

Organism: SCNpilot_P_inoc_Flavobacterium_40_86

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 15 / 38 MC: 1
Location: 48486..49028

Top 3 Functional Annotations

Value Algorithm Source
XRE family transcriptional regulator n=1 Tax=Flavobacterium sp. F52 RepID=J0RMR0_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 71.1
  • Coverage: 180.0
  • Bit_score: 247
  • Evalue 8.30e-63
XRE family transcriptional regulator {ECO:0000313|EMBL:KFF17836.1}; TaxID=1233950 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chr similarity UNIPROT
DB: UniProtKB
  • Identity: 72.8
  • Coverage: 180.0
  • Bit_score: 266
  • Evalue 3.10e-68
helix-turn-helix protein similarity KEGG
DB: KEGG
  • Identity: 67.8
  • Coverage: 180.0
  • Bit_score: 245
  • Evalue 1.20e-62

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Taxonomy

Chryseobacterium sp. JM1 → Chryseobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 543
ATGAAGAATAGGATTAAAATTTTGAGAGAAGAGAGAAATATGACTCAAAATGAACTTGCCGAAAAGTCAGGGCTTTCCCTGCGAACCATCCAGCGGATTGAAGCCGGGAATGCTCTCAAAGGGTTTACCTTAAAAGCAATAGCCCGATCATTGGAAACCGAACCCGAAAAGCTGCTTGCCGGTAGCGATGAAAATACCGGAATTGACAGGGCAAAATTAATTAACCTTTCGGCTTTATCGGGTCTTGTACTGCCATTTGGCGGGGTGATATTGCCTTTGATTTTAACCTACAAAACAAAGGACGCAAAAAATAAAGAACTGGGAAAAAACATCGTCAGTATTCAGATCCTGCTGAGCCTGATTACTTCTGTCCTGATGATCGTCAGTCCGTTTGTTCAAAAAGCATTAGGACTAAAATTCCCGCTGTTTATCCTCTTTTTAATTGCATTTCTTTGTCTGAAACTATGGGTAGTCATCAAAAACGGCATCAGTCTGAATCAAAAAAATGATTTGTGTATCCGGTTGAAAAACAGTTTTTTATAA
PROTEIN sequence
Length: 181
MKNRIKILREERNMTQNELAEKSGLSLRTIQRIEAGNALKGFTLKAIARSLETEPEKLLAGSDENTGIDRAKLINLSALSGLVLPFGGVILPLILTYKTKDAKNKELGKNIVSIQILLSLITSVLMIVSPFVQKALGLKFPLFILFLIAFLCLKLWVVIKNGISLNQKNDLCIRLKNSFL*