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scnpilot_p_inoc_scaffold_307_58

Organism: SCNpilot_P_inoc_Flavobacterium_40_86

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 15 / 38 MC: 1
Location: comp(59224..59937)

Top 3 Functional Annotations

Value Algorithm Source
Two-component system response regulatory protein, LytTR family n=1 Tax=Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9) RepID=H8XPT4_FLAIG similarity UNIREF
DB: UNIREF100
  • Identity: 40.3
  • Coverage: 236.0
  • Bit_score: 190
  • Evalue 2.10e-45
Contig_5, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ24959.1}; TaxID=1587524 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Fl similarity UNIPROT
DB: UniProtKB
  • Identity: 59.9
  • Coverage: 237.0
  • Bit_score: 299
  • Evalue 5.80e-78
Two-component system response regulatory protein, LytTR family similarity KEGG
DB: KEGG
  • Identity: 40.3
  • Coverage: 236.0
  • Bit_score: 190
  • Evalue 5.80e-46

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Taxonomy

Flavobacterium sp. MEB061 → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 714
ATGTGTTTTTCCTATATCATTATCGACGACGACAACCGCTATACTGCCGAAATACAGGAAAATTTCAACTATTTTCCGAATTATATCTGTGCCGGTATATTCAATGACAGCCAAACAACATTACAGCATATTATTACGATTAAACCCCATTTGGTTTTTATTGAAATTCCAGAAAATCCTGACCAAAACAAAGCCCTGTTCGCTACCATATCCGAATCTTTCCAATTCCTGGCAACGATGCCCTACTTTGTTGCCCTTTCCGGTACTTCTGCACATACATTAGCCGCTATTCAGTCCGGATTTTCCGATTATCTGTTACAGCCATTCCCCCTACAGGAGTTTGGCAAAATGCTCTTTAAGTTCGAAAAAAGAACTCCGGATCAGCTTTTCTCCAACATCTGTATAAAATCATACAGCGATTACCAGTTTGTTGATCTGAAAGATATTGTCTACTTAAAAGCCGATAACAATACCACAGACATCCAGATGTGCAATGGTAAAATTGTCAATGCCTATAAAACATTAAAGCATTTTGAAAGCAGTTTGCCTTTTTTCTTCCTGAGGATTCATAAAAGTTATATCGTCAATATTTTTCATGTTTCCAGAATCAATTTCGGCAAATCCAAATGCTTTTTAAACTATAACGAAACAATACCTTTTTCACTACATTACAAATACAACGTTGAAATTATTGTAAATAAAATGAATTTATAA
PROTEIN sequence
Length: 238
MCFSYIIIDDDNRYTAEIQENFNYFPNYICAGIFNDSQTTLQHIITIKPHLVFIEIPENPDQNKALFATISESFQFLATMPYFVALSGTSAHTLAAIQSGFSDYLLQPFPLQEFGKMLFKFEKRTPDQLFSNICIKSYSDYQFVDLKDIVYLKADNNTTDIQMCNGKIVNAYKTLKHFESSLPFFFLRIHKSYIVNIFHVSRINFGKSKCFLNYNETIPFSLHYKYNVEIIVNKMNL*