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scnpilot_p_inoc_scaffold_311_24

Organism: SCNpilot_P_inoc_Flavobacterium_40_86

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 15 / 38 MC: 1
Location: 25093..26127

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA ligase, Rnl2 family n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W3D2_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 65.9
  • Coverage: 340.0
  • Bit_score: 465
  • Evalue 6.30e-128
  • rbh
2'-5' RNA ligase {ECO:0000313|EMBL:KFF24132.1}; TaxID=307480 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium vrystaa similarity UNIPROT
DB: UniProtKB
  • Identity: 82.6
  • Coverage: 339.0
  • Bit_score: 576
  • Evalue 2.70e-161
RNA ligase similarity KEGG
DB: KEGG
  • Identity: 58.3
  • Coverage: 336.0
  • Bit_score: 412
  • Evalue 1.40e-112
  • rbh

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Taxonomy

Chryseobacterium vrystaatense → Chryseobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1035
ATGAGTGAATTTTCAGGATATGAAAAGATGCCTAGTAGCATGAAAAAACTAGGGCTAAGTGAAAAAGATTTTTCCGAAATGGAAAAATTAAAATGGGTTGTTACAGAAAAAGTCCATGGAGCAAACTTTAGTTTCATCTATGAAAAGGGTACTTTGAAATTTGCTAAAAGAAAAGAATACCTGAAGTGGACAGACGATTTTTTTGGTTTTCAATTGGTCGTAAACAAATTAGAAGATGCCATACTTCGTCTCTTTGAACAGCTGAGCAACGAAATAATCGGGGAAAAATATATTGTTTACGGTGAATTGTTTGGCGGCAAATACCCGCATCCGGAAGTCAATGTTATAAAGGATTTATATGCCATTCAAACCGGAGTGTATTATACGCCTGCAATTGAATTTTGTGCCTTTGATATTGCCATTGAAACAAATGGTTCCGATTCGAAATATTATCTGGATTATGAAACGTCACTGGCGTATTTTAAGCAGTTTGGAATATTTCATGCCAAACCATTATTCATTGGAAAATTTACTGAAGCGATGAACTTCAATATCAGAATGAACTCCACGATTCCGAAAGAATTTCAACTTCCGGAATTACAGGACAATTTAATTGAAGGTGTGGTGATCAAACCTTTTAATCAAATCGATCAGAGCACACTTTTATCAAGACCGATAGTAAAACTTAAAAATGCCGAGTTTGACGAAGAAGATAAATTTCATGAGGCCGAAAAATGGTCGTTCGTTCCGGATATTTCCTCTAAAACAGAAGATTTGTCTTTTATTGTAGCGGAATTAAGGAATTATGTCACTCAAAACAGATTGGAAAGCGCCGTCTCTAAAATTGGCCCGTTAGACAGGAGTAATCCGCTTCGGGTTTCTGAAATTAAAACCGAATTTTTAGATGATGTGCTCATCGATTTTAATGAAAACAACAACAATCTTTTAAACGATTTACTGCTTAGCGAAAAAGAGTGGATCATGGAAAGAGTGGATTTTGAAATCAATAAAATAATGGCTTCTGCTAACGGATAA
PROTEIN sequence
Length: 345
MSEFSGYEKMPSSMKKLGLSEKDFSEMEKLKWVVTEKVHGANFSFIYEKGTLKFAKRKEYLKWTDDFFGFQLVVNKLEDAILRLFEQLSNEIIGEKYIVYGELFGGKYPHPEVNVIKDLYAIQTGVYYTPAIEFCAFDIAIETNGSDSKYYLDYETSLAYFKQFGIFHAKPLFIGKFTEAMNFNIRMNSTIPKEFQLPELQDNLIEGVVIKPFNQIDQSTLLSRPIVKLKNAEFDEEDKFHEAEKWSFVPDISSKTEDLSFIVAELRNYVTQNRLESAVSKIGPLDRSNPLRVSEIKTEFLDDVLIDFNENNNNLLNDLLLSEKEWIMERVDFEINKIMASANG*