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scnpilot_p_inoc_scaffold_337_17

Organism: SCNpilot_P_inoc_Flavobacterium_40_86

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 15 / 38 MC: 1
Location: 18383..19546

Top 3 Functional Annotations

Value Algorithm Source
Sigma 54 related response regulator protein n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6S3K1_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 93.3
  • Coverage: 387.0
  • Bit_score: 705
  • Evalue 2.40e-200
  • rbh
Sigma 54 related response regulator protein {ECO:0000313|EMBL:ESU20999.1}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source similarity UNIPROT
DB: UniProtKB
  • Identity: 93.3
  • Coverage: 387.0
  • Bit_score: 705
  • Evalue 3.30e-200
two component sigma-54 specific Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 89.7
  • Coverage: 387.0
  • Bit_score: 678
  • Evalue 1.10e-192

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Taxonomy

Flavobacterium cauense → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1164
ATGCCTAAGATATTAATAATAGAAGACGAAGCAGCTATCCGGAGAGTATTGACAAAAATACTGTCTGAGGAGAATGATACCTATATCGTTGAAGAAGCGGAAGACGGACTTAAGGGATTGGAAAAGATTAAAAATGAAGATTACGATCTGGTACTTTGTGATATCAAGATGCCCAAGATGGATGGAGAAGAAGTGCTGGAAGCGGTAAAAAAGATAAAACCGGAAATTCCGATGGTGATGATCTCCGGACACGGCGATCTTGAAACAGCGGTTAATACCATGCGTTTGGGAGCATTTGACTATATTTCCAAACCGCCCGATTTAAACCGTTTGCTAAATACGGTCCGCAATGCCTTAGACAGAAAACAACTCGTTGTTGAAAATAAAATACTAAAGAAAAAAGTCAGTAAAAACTACGAGATGATCGGGAATAGCGAGCCTATTAACCACATCAAGGAGATTATTGACAAAGTAGCGCCCACAGAAGCGCGGGTACTGATAACCGGACCTAACGGAACCGGGAAAGAACTCGTTGCCCACCAGCTGCATGAAAAAAGCGAACGGGCTGCGGCACCGCTGATAGAAGTGAACTGTGCTGCGATTCCGTCCGAATTGATCGAAAGTGAATTATTCGGTCACGTAAAAGGAGCTTTTACTTCGGCTGTAAAGGATCGTGCCGGAAAGTTTGAAGCGGCCGATAAGGGAACCATCTTCCTGGATGAAATAGGCGATATGAGCCTTCCAGCCCAGGCAAAAGTACTGAGAGCTTTACAGGAAAACATGATTACCCGTGTAGGGGCGGATAAAGACATAAAAGTAGATGTCCGTATTGTGGCAGCAACCAATAAAGACCTTAAAAAAGAAATTGAAGAAGGACGCTTTAGAGAAGATTTATACCACCGTCTGGCGGTAATCTTAATTAAAGTACCGGCGCTAAACGACAGAAGAGACGATATCCCGTTGCTGGTAAAACACTTTGCCGAAAAAATTGCTTCCGAACAGGGAAATACGGCAAAGAAATTTTCGGCTGCCGCAGTAAAACTGTTACAGGAATACGACTGGACCGGAAATATCCGGGAACTGCGCAATGTGATTGAACGGTTAATCATTTTAGGCGGAGCGGAAATATCGGAGAATGACGTGAAAATGTTCGCGAGCAAATAG
PROTEIN sequence
Length: 388
MPKILIIEDEAAIRRVLTKILSEENDTYIVEEAEDGLKGLEKIKNEDYDLVLCDIKMPKMDGEEVLEAVKKIKPEIPMVMISGHGDLETAVNTMRLGAFDYISKPPDLNRLLNTVRNALDRKQLVVENKILKKKVSKNYEMIGNSEPINHIKEIIDKVAPTEARVLITGPNGTGKELVAHQLHEKSERAAAPLIEVNCAAIPSELIESELFGHVKGAFTSAVKDRAGKFEAADKGTIFLDEIGDMSLPAQAKVLRALQENMITRVGADKDIKVDVRIVAATNKDLKKEIEEGRFREDLYHRLAVILIKVPALNDRRDDIPLLVKHFAEKIASEQGNTAKKFSAAAVKLLQEYDWTGNIRELRNVIERLIILGGAEISENDVKMFASK*