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scnpilot_p_inoc_scaffold_337_73

Organism: SCNpilot_P_inoc_Flavobacterium_40_86

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 15 / 38 MC: 1
Location: 76276..77667

Top 3 Functional Annotations

Value Algorithm Source
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=1144313 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriace similarity UNIPROT
DB: UniProtKB
  • Identity: 85.1
  • Coverage: 463.0
  • Bit_score: 806
  • Evalue 2.20e-230
RNA-splicing ligase RtcB n=1 Tax=Flavobacterium sp. CF136 RepID=J2SIX8_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 85.1
  • Coverage: 463.0
  • Bit_score: 806
  • Evalue 1.50e-230
  • rbh
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 84.2
  • Coverage: 463.0
  • Bit_score: 799
  • Evalue 5.30e-229

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Taxonomy

Flavobacterium sp. CF136 → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1392
ATGGGAAATAAATTATCCGGGAAAGACCTTATAAAATTGGGTTTTCCTAAAAACAATAGTATCAATATAGCCTTAGGGCAAATCAACAGATATCGGAAAAGAGAAAAAAAAGAGAGCATTTTAACGGAAGCAAAAGCGGTATTGCTTGCTCCTGAAAAGTTCAAAAACCACGGCACCTGGGGAAAGGTTGCAGAAGGATTGGTAAATCCGGTAGCCGTCAGAATGCAGCAGCTGCGTACAACACGGGCACCGTTCACGATTTTTGGAGAAAATGAAATTGATGAACAGGCAAAGTTTCAGCTTTATGATGCTTTAAAACTGCCAATAGCCGTTGCAGGTGCTTTAATGCCGGATGCACATTCCGGTTACGGCCTGCCAATCGGTGGGGTGCTGGCAACAGAAAACGCCGTGATTCCTTATGGAGTGGGTGTCGATATTGGCTGCCGGATGAGTCTGTCCATCTTCGATCTGCCGGCTGCGTTTCTGAAAGGAAAAGAGTTGCAGCTACAGGCAATCCTGAAAGAACATACCAAATTCGGGATGTATGAAACCCATGCGATCAAAGCCGATCATGAAGTGTTTTCCAGACCGGAGTTTAAAGAAATTCCTTTTGTGAAAGCTCTGTTGGATAAAGCTTACAAACAGCTGGGAACTTCCGGCAGCGGGAATCACTTTGTAGAATTCGGGATCGTAAACATTGCCCATCCGCTACAGGAATGGAAAATAGAAGCCGGGGAGTATTTTGCCGTTTTATCCCACAGCGGTTCCCGCGGACTGGGCGCCAATATCGCCAAACAGTATACCTATCTGGCAGGCAAACAATGTCCGTTGCCTAAAAATGTACAGCATCTGGCATGGCTGGATCTGAATACCCATGACGGGCAGGAATACTGGAGTGCTATGAATTTAGCCGGTGATTATGCGAAAGCCTGCCATGACGATATTCATAGAAGGATCGCGAAAATATTAGGCAAAAGAGTAGTGGCAACAATAGAAAACCATCACAATTTTGCCTGGAAAGAAATGCATCAGGGAAAAGAGTGTATCGTTCACCGGAAAGGAGCGACACCGGCTGCCGAAGGACAATTGGGGATTATTCCCGGTTCGATGACAGCCCCTGGTTATATCGTAATGGGAAAAGGCAATGCAGCCAGTCTGAATTCGGCTTCACACGGCGCCGGAAGATTGTTTTCGAGAGCAAAGTGCAAAACCACTTTTACGCAGAGCGATATTAAAAAGGAGCTCCGGAAACATGATGTAGCGCTCATTGGCGGCGGAATAGACGAAGCACCAATGGCTTATAAAGACATCATGAAAGTGATGGACAACCAGCAGGAACTGGTAACGGTTTTGGGCACATTTACGCCTAAAATTGTTAGAATGGACCGATAA
PROTEIN sequence
Length: 464
MGNKLSGKDLIKLGFPKNNSINIALGQINRYRKREKKESILTEAKAVLLAPEKFKNHGTWGKVAEGLVNPVAVRMQQLRTTRAPFTIFGENEIDEQAKFQLYDALKLPIAVAGALMPDAHSGYGLPIGGVLATENAVIPYGVGVDIGCRMSLSIFDLPAAFLKGKELQLQAILKEHTKFGMYETHAIKADHEVFSRPEFKEIPFVKALLDKAYKQLGTSGSGNHFVEFGIVNIAHPLQEWKIEAGEYFAVLSHSGSRGLGANIAKQYTYLAGKQCPLPKNVQHLAWLDLNTHDGQEYWSAMNLAGDYAKACHDDIHRRIAKILGKRVVATIENHHNFAWKEMHQGKECIVHRKGATPAAEGQLGIIPGSMTAPGYIVMGKGNAASLNSASHGAGRLFSRAKCKTTFTQSDIKKELRKHDVALIGGGIDEAPMAYKDIMKVMDNQQELVTVLGTFTPKIVRMDR*