ggKbase home page

scnpilot_p_inoc_scaffold_794_1

Organism: SCNpilot_P_inoc_Flavobacterium_40_86

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 15 / 38 MC: 1
Location: comp(412..1227)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriacea similarity UNIPROT
DB: UniProtKB
  • Identity: 85.2
  • Coverage: 270.0
  • Bit_score: 461
  • Evalue 7.70e-127
Pseudouridylate synthase n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6S1Z4_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 85.2
  • Coverage: 270.0
  • Bit_score: 461
  • Evalue 5.50e-127
  • rbh
pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 80.6
  • Coverage: 273.0
  • Bit_score: 433
  • Evalue 4.50e-119

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Flavobacterium cauense → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 816
ATGGAAGAAAATGTAAAACGCCTTAATAAATTCTTATCCGAAACCGGATTTTGTTCCCGTCGTGAGGCGGACAGGCTTATTGAGGAAGGTCGTGTAACCATTAACGGGATCGTTCCGGAAATGGGTACTAAAGTGACTCCTGATGACGAAGTAAGAGTAGATGGAAAACTGATTCGTGAGAAAACAGAAAAACCGGTTTATCTGGCCTTTAACAAGCCTGCCGGAATTGAATGTACCACCAATCAGGATGTCCGCAACAATATTGTGGACTACATCAATTATCCGAAACGTATTTTCCCGATTGGCCGGTTGGATAAAGCCAGTGAAGGCTTAATCTTTATGACGGATGATGGTGACATTGTCAACAAAATCCTTCGTGCGCGTAACAATCACGAAAAAGAATATGTCGTTACGGTTAACAAACCGATCACCGATCGTTTTATTCAGCGAATGGGTAACGGTATTCCGATATTGGATACGGTAACCAAAAAATGTAAGGTTGAACAGATCAGCAAATTTGTTTTCCGGATCATTCTGACGCAGGGATTGAACCGTCAGATCAGAAGAATGTGCGAATACCTGGATTATGAGGTTACCGTCTTAAAACGTATCCGCATTATTAATATTTCACTGGATGTTCAAGTTGGCCGTTACAGAGATCTAACGGATGCTGAAATCAAAACACTGAACGAGTTGATTGCTCCTTCCAGCAAAACGGAAGAAGCCAGTTTACCGAAACCGGCACCAGGCAGAGAAGTAAAAAAAGTATTTTCTCCCAGAACGCAGAACAACCGAAATTTTAGAAACAAAAAATAA
PROTEIN sequence
Length: 272
MEENVKRLNKFLSETGFCSRREADRLIEEGRVTINGIVPEMGTKVTPDDEVRVDGKLIREKTEKPVYLAFNKPAGIECTTNQDVRNNIVDYINYPKRIFPIGRLDKASEGLIFMTDDGDIVNKILRARNNHEKEYVVTVNKPITDRFIQRMGNGIPILDTVTKKCKVEQISKFVFRIILTQGLNRQIRRMCEYLDYEVTVLKRIRIINISLDVQVGRYRDLTDAEIKTLNELIAPSSKTEEASLPKPAPGREVKKVFSPRTQNNRNFRNKK*