ggKbase home page

scnpilot_p_inoc_scaffold_805_4

Organism: SCNpilot_P_inoc_Flavobacterium_40_86

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 15 / 38 MC: 1
Location: comp(2432..3805)

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane protein oprM n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FVB9_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 68.7
  • Coverage: 454.0
  • Bit_score: 640
  • Evalue 1.40e-180
  • rbh
Membrane protein {ECO:0000313|EMBL:KGO81160.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense similarity UNIPROT
DB: UniProtKB
  • Identity: 71.2
  • Coverage: 455.0
  • Bit_score: 657
  • Evalue 1.20e-185
outer membrane efflux protein precursor similarity KEGG
DB: KEGG
  • Identity: 60.6
  • Coverage: 457.0
  • Bit_score: 555
  • Evalue 1.00e-155

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Flavobacterium beibuense → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1374
ATGGTTGTCATAGCAGCTGCATCGGTGATGCAGTCCTGCTTTGTCGCCAAAAAATACGAAAGACCGAAAGTAGCTACCGAAAACCTGTACCGAACAGACCAGGCAGCTAAAGACAGTACTTCTATGGCGAGTGTTTCATGGAAAACGCTTTTTACAGATCCAATTTTACAGGGACATATTGAAAAAGGACTGCAAAACAATTTTGATATCCGTATTGCGATACAAACCATTGTTGCTGCCGAAGCCAATCTGAAACAAGGAAAAGCAGGCTACTTTCCTACCCTGAGTTTAGGGGCTAACCTGACCCACCAGGAACTGGCAAAAAACAGTCAGTTCGGATCGTTTTTTAACGGTTCTCTGGATCAGTACCAGCTTTCCGGAAACCTGTCCTGGGAAGCAGATGTCTGGGGAAAAATCAGAAGTAATAAAAGAGCGGCAAATGCTTCCTATTTACAAACGGTAGCCGCAAACCAGGCAGTTAAAACACAGTTGTTGGCGAGTATTGCTGCTACCTATTACCAATTGCTGTCTTTGGATTCGCAGTTAAAAATAGCGCAGGAAACGCTTTTAAACCGCGATAACAGTATTGTTACGATTAAAGCGTTAAAAGATGCCGGTAATGTAAACGAGGTGGCTGTTAAACAAACGGAAGCACAGAAATATGCAACCGACCTGATTATTGCCGATTTAAAAACAAACATCACGTTGTTAGAGAATACCATGTCTATTCTTTTAGGACAGGCTCCGGGGAAAATCGAAAGAAGTACTCTTGAAGCCCAGAAAATGAATGTGGATGTTGATTTTGGCGTGCCTTCAGAGCTGTTAAGCAAAAGACCGGACGTTATTGCGGCAGAATACAATCTGATTACCAGTTTCGAATTGACCAATGTAGCCAAAAGTAATTTCTATCCGTCCTTTACGGTTACCGCTACCGGTGGTTTCCAGAGTTTGCAGTTAAAAGAATGGTTTAGTACCAATTCCCTGTTTGCGAACATTGTTGCCGGATTAACCCAGCCTATTTTCAATCAGCGTCAGATCCGAACCAAATATGAAGTAGCAAAATCCAACCAGGAAAAAGCCTATTTACAATTTGAGCAGTCTTTGCTGAATGCCGGAAAAGAAGTTTCGGATGCGCTGGCACAATATAAAAATGAAACGGACAAGTTAGTCATCCGCGAAAAACAGGTAGATGCTTTACGCAAAGCAGCAAGTTATTCTGACGAGTTGTTAACGCAGGGTTTTGTTAACTATTTAGAAGTGTTAACGGCTAAAGATTCTGCTTTAAGCAGCGAACTGGATTTGATTAATAACAAATACAAACAATACAATGCCATCATCATGCTTTATAAAGCATTGGGTGGCGGTGTGCAATAG
PROTEIN sequence
Length: 458
MVVIAAASVMQSCFVAKKYERPKVATENLYRTDQAAKDSTSMASVSWKTLFTDPILQGHIEKGLQNNFDIRIAIQTIVAAEANLKQGKAGYFPTLSLGANLTHQELAKNSQFGSFFNGSLDQYQLSGNLSWEADVWGKIRSNKRAANASYLQTVAANQAVKTQLLASIAATYYQLLSLDSQLKIAQETLLNRDNSIVTIKALKDAGNVNEVAVKQTEAQKYATDLIIADLKTNITLLENTMSILLGQAPGKIERSTLEAQKMNVDVDFGVPSELLSKRPDVIAAEYNLITSFELTNVAKSNFYPSFTVTATGGFQSLQLKEWFSTNSLFANIVAGLTQPIFNQRQIRTKYEVAKSNQEKAYLQFEQSLLNAGKEVSDALAQYKNETDKLVIREKQVDALRKAASYSDELLTQGFVNYLEVLTAKDSALSSELDLINNKYKQYNAIIMLYKALGGGVQ*