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scnpilot_p_inoc_scaffold_805_6

Organism: SCNpilot_P_inoc_Flavobacterium_40_86

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 15 / 38 MC: 1
Location: comp(7011..8135)

Top 3 Functional Annotations

Value Algorithm Source
secretion protein HlyD n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B4D756 similarity UNIREF
DB: UNIREF100
  • Identity: 64.9
  • Coverage: 373.0
  • Bit_score: 477
  • Evalue 1.70e-131
  • rbh
Secretion protein HlyD {ECO:0000313|EMBL:KIA99477.1}; TaxID=1566023 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. similarity UNIPROT
DB: UniProtKB
  • Identity: 64.5
  • Coverage: 375.0
  • Bit_score: 473
  • Evalue 2.10e-130
efflux transporter, rnd family, mfp subunit similarity KEGG
DB: KEGG
  • Identity: 48.7
  • Coverage: 359.0
  • Bit_score: 342
  • Evalue 1.10e-91

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Taxonomy

Flavobacterium sp. KMS → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1125
ATGAAGAATAAATTAATCTTTAGCATGTTGGTGACTACACTGATTCTGGCATCGTGTGGCGACAAGAAATCACAACAACAGCAGGCAAATGGACCGATGCCCTTCCCGGTTCAAAAAGTAGTTAAAGAGAACGCTATAACCTATCAAGAATATTCTGCGAATTTACAAGGACAGCAAAATGTTGAAATCAGACCGAAAGTAAACGGTTTTATTGAAAAGATCTTTGTTGACGAAGGACAAAACGTACGAAAAGGTCAAATACTGTTTAAACTGGAAACCAACACCCTTTCGCAGGATGCAAACGCCAGCAAAGCTGCTGTAAACGCTGCTCAGGTGGAAGTAAACAGGCTGATTCCTTTAGTGGAGCGCAAAATCATCAGTAATGTGACGCTTGAAACGGCTAAAGCCAATTTAGCTCAGGCGAAAGCGAATTACAACAGTATTGCTTCCAATATCAATTTTGCGACGATAACCAGCCCGGTAGATGGTGTTATCGGAAGCATACCGTACAAAGTGGGAAGCCTTGTTGGTTCTACTACAGTAGATCCGCTGACAACCGTATCGGATATCCGTAACATCCGTGCCTATTTCACGATGAACGAAAAACAGCTTATCCATTTCAACAAAACCTTTAAAGGCGCTACAACTGCTGAAAAGATCAAGGCATTGCCTCCTGTTGAGCTGATTTTGGCTGACAATTCGGTATATGATCAGAAAGGAAAAATTGAAACAATCAACGGATTGGTTAACGCCCGTACCGGTAGTACCGAATTCAGAGCGCAGTTTCCAAACCCTCAGGCCGTATTGAGAAGCGGCGGCAGCGGGATCATCCGTTTACCAATAGAGGAAAAAGACGTGATTTTATTACCGCAAAATGCAGTGTACGACATGCAGGGGAAACAAATGGTATATACAGTTGGCAAAGACAATAAAGTACATTCCAAAATTATTGAGACTAACGGAACATCCGGATTGAATTTCATCGTTACCAGCGGTATCGAACCTAATGAAATTGTTGTTGTCGAAGGGGTAACCAAATTAACAGACAACCAGGAAATCATTCCTCAGGAAGCTGGTAAAAATGCCCAGACCGCTCCGGCTCCTAATGCTCAAGCTAAAAAATAG
PROTEIN sequence
Length: 375
MKNKLIFSMLVTTLILASCGDKKSQQQQANGPMPFPVQKVVKENAITYQEYSANLQGQQNVEIRPKVNGFIEKIFVDEGQNVRKGQILFKLETNTLSQDANASKAAVNAAQVEVNRLIPLVERKIISNVTLETAKANLAQAKANYNSIASNINFATITSPVDGVIGSIPYKVGSLVGSTTVDPLTTVSDIRNIRAYFTMNEKQLIHFNKTFKGATTAEKIKALPPVELILADNSVYDQKGKIETINGLVNARTGSTEFRAQFPNPQAVLRSGGSGIIRLPIEEKDVILLPQNAVYDMQGKQMVYTVGKDNKVHSKIIETNGTSGLNFIVTSGIEPNEIVVVEGVTKLTDNQEIIPQEAGKNAQTAPAPNAQAKK*