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scnpilot_p_inoc_scaffold_805_34

Organism: SCNpilot_P_inoc_Flavobacterium_40_86

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 15 / 38 MC: 1
Location: 34410..35315

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_0181 similarity UNIPROT
DB: UniProtKB
  • Identity: 84.4
  • Coverage: 301.0
  • Bit_score: 524
  • Evalue 1.10e-145
ribonuclease Z (EC:3.1.26.11) similarity KEGG
DB: KEGG
  • Identity: 73.8
  • Coverage: 301.0
  • Bit_score: 470
  • Evalue 3.70e-130
Ribonuclease Z n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SLL7_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 84.4
  • Coverage: 301.0
  • Bit_score: 524
  • Evalue 7.60e-146
  • rbh

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Taxonomy

Flavobacterium limnosediminis → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 906
ATGAAACTGACCATATTGGGCTGTTATGCCGCAACACCACGAACAATTACCAATCCGACAGCACAGGTTCTGGAAATTAAAAACCGGATGTTTCTGATTGACTGCGGTGAAGGAACACAGGTACAGCTTCGGAAAAATAAAATAAAATTCTCCCGTATCGAGCACATCTTTATTTCCCATTTGCATGGCGACCATTTCTATGGCCTGGTGGGACTGATTTCTACCTTTATGCTGTTAAACAGGGTGAGCGATTTACATGTTTACGGACCAAAAGGAATCAAGGAAGTTATTTTACTGCAATTGCGGCTTTCCGGCTCTTTTACAGGCTATAACCTGTATTTCCATGAATTGGAAAGCACGGAGAGTGAAGTTGTTTATGAAGACGAAAAAGTTATTGTGAAAACAATTCCTTTAAAGCACAGGGTTTATACCAATGGCTTTTTGTTTCAGGAAAAAAATAAAGAACGCAAACTCGATATCAATACCATATTAAACTACAATATTGAACAGTGCTATTACCAGAAGATCAAAAACGGTGGTGATATCACTTTAGATGACGGCACGGTGATCCCTAATGCCAAACTTACATTTGACCCGGAACCGGAAAAAAGCTATGCGTTTTGCTCCGATACCGTTTATGATGAAACCATAGTACCGTATCTTAAAAACGTAAGTGTTCTATACCACGAAAGCACCTTCCTGGAAACGGAAGCACATCTGGCAGGAAAAACCATGCATACCACGGCAAAACAGGCAGCAGCGATTGCAAAGCTTGCCAATGCCGGTCAGCTGGTTATGGGACATTATTCCACGCGGTATGAAAGCATAGCGCATTTTAAAGAAGAAGCACAAACCATATTTCCGCATATTTTATTGGCAGACGATGGTAAGTCGTTTGAATTCTAA
PROTEIN sequence
Length: 302
MKLTILGCYAATPRTITNPTAQVLEIKNRMFLIDCGEGTQVQLRKNKIKFSRIEHIFISHLHGDHFYGLVGLISTFMLLNRVSDLHVYGPKGIKEVILLQLRLSGSFTGYNLYFHELESTESEVVYEDEKVIVKTIPLKHRVYTNGFLFQEKNKERKLDINTILNYNIEQCYYQKIKNGGDITLDDGTVIPNAKLTFDPEPEKSYAFCSDTVYDETIVPYLKNVSVLYHESTFLETEAHLAGKTMHTTAKQAAAIAKLANAGQLVMGHYSTRYESIAHFKEEAQTIFPHILLADDGKSFEF*