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scnpilot_p_inoc_scaffold_1196_13

Organism: SCNpilot_P_inoc_Flavobacterium_40_86

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 15 / 38 MC: 1
Location: 18305..18979

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, winged helix family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PNA6_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 73.7
  • Coverage: 224.0
  • Bit_score: 344
  • Evalue 6.20e-92
Cell cycle response regulator CtrA {ECO:0000313|EMBL:CEJ69305.1}; TaxID=1300143 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chrys similarity UNIPROT
DB: UniProtKB
  • Identity: 76.2
  • Coverage: 223.0
  • Bit_score: 352
  • Evalue 5.40e-94
winged helix family two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 73.7
  • Coverage: 224.0
  • Bit_score: 344
  • Evalue 1.70e-92

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Taxonomy

Chryseobacterium oranimense → Chryseobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 675
ATGAAAATTCTTATTATCGAAGACGAAAAGGAACTGGCTCTGGATATAGCACAATATATGTCCGGTGAAAACTATTTGTGTGAGATAGCGGCTACTTATGATCAGGCACTTGACAAAATCCGGTTTTACAATTATGATTGTATTTTACTGGATTTAATGCTGCCCGGCGGTGACGGCCTTAAAATACTGGATTTTTTAAAAGACGAAAATAAATCGGAAGGTGTTATTATACTTTCGGCTAAGAATTCCTTAGAGGACAAAATAAAAGGCTTACAGCTTGGTGCCGACGATTATCTCGCCAAACCATTCCACCACTCCGAATTGGCCGCAAGGATCCACTCTGTCATCAGACGAAAACAGTTTGACAATTCCAATACAATTGTACTCAATGAGCTGCGTATCGATTTACTCGCCAAAACCGTTCACATTCACGACACCATAATCACGTTAACGAAAAAAGAGTTTGACCTGCTGATTTTCTTTATTGGCAACAAAAACAAAGTGATCTCCAAAAGTGCCCTCGCAGAACACTTATCCGGCGATATAGCCGACATGTTCGACAATCATGATTTTGTCTATGCGCATGTCAAAAATCTAAAACGGAAACTGCTGGAAGCCAATTGTGATCACTATTTAAAAACGATTTACGGAACCGGTTATAAATGGGAAATATGA
PROTEIN sequence
Length: 225
MKILIIEDEKELALDIAQYMSGENYLCEIAATYDQALDKIRFYNYDCILLDLMLPGGDGLKILDFLKDENKSEGVIILSAKNSLEDKIKGLQLGADDYLAKPFHHSELAARIHSVIRRKQFDNSNTIVLNELRIDLLAKTVHIHDTIITLTKKEFDLLIFFIGNKNKVISKSALAEHLSGDIADMFDNHDFVYAHVKNLKRKLLEANCDHYLKTIYGTGYKWEI*