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scnpilot_p_inoc_scaffold_2076_8

Organism: SCNpilot_P_inoc_Flavobacterium_40_86

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 15 / 38 MC: 1
Location: 4412..4996

Top 3 Functional Annotations

Value Algorithm Source
Predicted transcriptional regulator, TetR family n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FEH4_FLAJ1 similarity UNIREF
DB: UNIREF100
  • Identity: 56.4
  • Coverage: 195.0
  • Bit_score: 219
  • Evalue 2.60e-54
Strain DSM 12611 Contig12, whole genome shotgun sequence {ECO:0000313|EMBL:KIO52009.1}; TaxID=37752 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacteriu similarity UNIPROT
DB: UniProtKB
  • Identity: 58.5
  • Coverage: 195.0
  • Bit_score: 225
  • Evalue 5.10e-56
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 56.4
  • Coverage: 195.0
  • Bit_score: 219
  • Evalue 7.30e-55

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Taxonomy

Flavobacterium hibernum → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 585
ATGAACAAAGCCGAAAAAACAAAGCAGTTTATTATTGAGAAGACCGCTCCTATTTTTAATATGAAGGGCTATTCCGGCACGTCCATGCAGGATATCACTTTAGCCACCGGACTGACCAAAGGCAGTATATACGGGAACTTTAAAAATAAAGACGAAGTGGCACTGGCTGTTTTTCAGTACAATTATGAAAAAATGCAGACTTTGTTTATACAGGAGATCAGCAAAAAGACTACCTACCGGGAAAAATTAATGAGCTATCCGGAACTGTATGAAAAATTCGCCACCGAAAGATTTCCTTTGGGCGGCTGTCCGATTATGAATACCGCAATTGAAGCAGACGATACCCATCCGCAGCTCAAAGCATTGGCAAAAAAAGCCATGCTGTTCTGGAAAGACAGCCTGGTACGCCTGATCAATAAAGGTATCGAAAAGAACGAATTCAAAAGCACTACTAACGCCGATGAAAATGCCCTGACCATTATCGCTCTGATTGAAGGCGCAATAATGATGATCAACCTGACCGGCAAGTTGGACTATCATCAGTCGATGATGAATACCCTCCGAAAAGTAATAACCGCACTATAA
PROTEIN sequence
Length: 195
MNKAEKTKQFIIEKTAPIFNMKGYSGTSMQDITLATGLTKGSIYGNFKNKDEVALAVFQYNYEKMQTLFIQEISKKTTYREKLMSYPELYEKFATERFPLGGCPIMNTAIEADDTHPQLKALAKKAMLFWKDSLVRLINKGIEKNEFKSTTNADENALTIIALIEGAIMMINLTGKLDYHQSMMNTLRKVITAL*