ggKbase home page

scnpilot_p_inoc_scaffold_80

Search features with annotation key words

Displaying items 271-300 of 577 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_80_271
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(292724..293860)
DNA (1137bp) protein (379aa)
FAD dependent oxidoreductase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G449_NOVAD rbh
FAD dependent oxidoreductase
FAD dependent oxidoreductase {ECO:0000313|EMBL:ABD27374.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosph
scnpilot_p_inoc_scaffold_80_272
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(293857..295227)
DNA (1371bp) protein (457aa)
BFD-like (2Fe-2S)-binding protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G448_NOVAD rbh
BFD-like (2Fe-2S)-binding protein rbh
BFD-like (2Fe-2S)-binding protein {ECO:0000313|EMBL:ABD27375.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="No
scnpilot_p_inoc_scaffold_80_273
Pseudomonas oryzihabitans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(295209..295532)
DNA (324bp) protein (108aa)
NAD(FAD)-dependent dehydrogenase n=1 Tax=Pseudomonas sp. 313 RepID=UPI0002D862FE
NAD(FAD)-dependent dehydrogenase {ECO:0000313|EMBL:KIZ50752.1}; TaxID=47885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomona
hypothetical protein
scnpilot_p_inoc_scaffold_80_274
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(295529..297301)
DNA (1773bp) protein (591aa)
Peptide/nickel transport system ATP-binding protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EFZ8_9SPHN rbh
ABC transporter
Peptide/nickel transport system ATP-binding protein {ECO:0000313|EMBL:EHJ59687.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphing
scnpilot_p_inoc_scaffold_80_275
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(297298..298119)
DNA (822bp) protein (274aa)
Peptide/nickel transport system permease protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EFZ9_9SPHN rbh
DNA-directed RNA polymerase subunit alpha
Peptide/nickel transport system permease protein {ECO:0000313|EMBL:EHJ59688.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobi
scnpilot_p_inoc_scaffold_80_276
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(298116..299090)
DNA (975bp) protein (325aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G444_NOVAD rbh
binding-protein-dependent transport systems inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABD27379.1}; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonad
scnpilot_p_inoc_scaffold_80_277
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(299087..300607)
DNA (1521bp) protein (507aa)
Extracellular solute-binding protein, family 5 n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G443_NOVAD rbh
extracellular solute-binding protein
Extracellular solute-binding protein, family 5 {ECO:0000313|EMBL:ABD27380.1}; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadacea
scnpilot_p_inoc_scaffold_80_278
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(300604..301884)
DNA (1281bp) protein (427aa)
FAD dependent oxidoreductase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G442_NOVAD rbh
FAD dependent oxidoreductase
FAD dependent oxidoreductase {ECO:0000313|EMBL:ABD27381.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosph
scnpilot_p_inoc_scaffold_80_279
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(301890..302558)
DNA (669bp) protein (223aa)
Haloacid dehalogenase, type II n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G441_NOVAD rbh
haloacid dehalogenase
Haloacid dehalogenase, type II {ECO:0000313|EMBL:ABD27382.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novos
scnpilot_p_inoc_scaffold_80_280
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(302706..303659)
DNA (954bp) protein (318aa)
Gyoxylate/hydroxypyruvate reductase A n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EG03_9SPHN rbh
2-hydroxyacid dehydrogenase
Gyoxylate/hydroxypyruvate reductase A {ECO:0000313|EMBL:EHJ59692.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sourc
scnpilot_p_inoc_scaffold_80_281
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(303656..304648)
DNA (993bp) protein (331aa)
Conserved hypothetical membrane protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G439_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:KHS44500.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobi
hypothetical protein
scnpilot_p_inoc_scaffold_80_282
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(304727..306859)
DNA (2133bp) protein (711aa)
TonB-dependent siderophore receptor n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IDG6_9SPHN rbh
TonB-dependent siderophore receptor
TonB-dependent siderophore receptor {ECO:0000313|EMBL:CCA90341.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="
scnpilot_p_inoc_scaffold_80_283
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(307090..308265)
DNA (1176bp) protein (392aa)
membrane protein n=1 Tax=Sphingobium sp. YL23 RepID=UPI0003B76231
hypothetical protein Tax=GWF1_Sphingomonadales_63_6_curated
hypothetical protein
scnpilot_p_inoc_scaffold_80_284
unknown

Not on your lists

comp(308325..308588)
DNA (264bp) protein (88aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_80_285
Sphingobium sp. Ant17, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(308720..309085)
DNA (366bp) protein (122aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI000373C56E
Copper resistance protein CopC {ECO:0000313|EMBL:EXS70510.1}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingob
copC; copper resistance protein CopC
scnpilot_p_inoc_scaffold_80_286
unknown

Not on your lists

309232..309501
DNA (270bp) protein (90aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_80_287
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

309498..309947
DNA (450bp) protein (150aa)
heavy metal resistance protein n=1 Tax=Sphingobium xenophagum RepID=UPI000312C6FD
Heavy metal resistance protein {ECO:0000313|EMBL:KEQ54704.1}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobiu
hypothetical protein
scnpilot_p_inoc_scaffold_80_288
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

309947..310537
DNA (591bp) protein (197aa)
RNA polymerase sigma factor cnrH n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MIK8_9SPHN
RNA polymerase sigma factor cnrH {ECO:0000313|EMBL:CCW16781.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphing
RNA polymerase ECF-type sigma factor
scnpilot_p_inoc_scaffold_80_289
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

311336..312421
DNA (1086bp) protein (362aa)
Glycosyltransferase n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QFA0_9BRAD
Glycosyltransferase {ECO:0000313|EMBL:EIG58456.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM
glycosyl transferase family protein
scnpilot_p_inoc_scaffold_80_290
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

312923..313513
DNA (591bp) protein (197aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z7C7_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KGB57010.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s
hypothetical protein
scnpilot_p_inoc_scaffold_80_291
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(313708..314634)
DNA (927bp) protein (309aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6E7D9_9SPHN
WalW protein
Uncharacterized protein {ECO:0000313|EMBL:EHJ62762.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
scnpilot_p_inoc_scaffold_80_292
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(314739..316460)
DNA (1722bp) protein (574aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YHZ1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAD47627.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
histidine kinase
scnpilot_p_inoc_scaffold_80_293
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

316770..317237
DNA (468bp) protein (156aa)
AsnC family transcriptional regulator n=1 Tax=Novosphingobium nitrogenifigens RepID=UPI0002E595B9
AsnC family transcriptional regulator {ECO:0000313|EMBL:EGD60825.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source
AsnC family transcriptional regulator
scnpilot_p_inoc_scaffold_80_294
Sphingobium quisquiliarum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(317323..318834)
DNA (1512bp) protein (504aa)
succinate CoA transferase (EC:3.1.2.1)
Acetyl-CoA hydrolase n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0HSC5_9SPHN rbh
Acetyl-CoA hydrolase {ECO:0000313|EMBL:EQB02230.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium quisqu
scnpilot_p_inoc_scaffold_80_295
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

319141..320211
DNA (1071bp) protein (357aa)
Diguanylate cyclase n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GTB4_SPHAL rbh
diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:ABF53108.1}; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis alaske
scnpilot_p_inoc_scaffold_80_296
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

320392..322638
DNA (2247bp) protein (749aa)
CHASE4-family GGDEF/EAL protein (EC:2.7.13.3)
CHASE4-family GGDEF/EAL protein n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=B8H226_CAUCN rbh
GGDEF family protein {ECO:0000313|EMBL:AAK22842.1}; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentu
scnpilot_p_inoc_scaffold_80_297
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(322643..324010)
DNA (1368bp) protein (456aa)
Permease; putative ethanolamine transporter n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZBD4_9SPHN rbh
Permease putative ethanolamine transporter {ECO:0000313|EMBL:EGD58168.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" s
ethanolamine transporter
scnpilot_p_inoc_scaffold_80_298
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(324007..324816)
DNA (810bp) protein (270aa)
Ethanolamine ammonia-lyase light chain {ECO:0000256|SAAS:SAAS00064961}; EC=4.3.1.7 {ECO:0000256|SAAS:SAAS00064958};; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadal
ethanolamine ammonia-lyase small subunit (EC:4.3.1.7)
Ethanolamine ammonia-lyase light chain n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZBD5_9SPHN
scnpilot_p_inoc_scaffold_80_299
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(324813..326207)
DNA (1395bp) protein (465aa)
ethanolamine ammonia-lyase heavy chain (EC:4.3.1.7)
Ethanolamine ammonia-lyase heavy chain n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZBD6_9SPHN rbh
Ethanolamine ammonia-lyase heavy chain {ECO:0000313|EMBL:EGD58166.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sourc
scnpilot_p_inoc_scaffold_80_300
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

326469..327407
DNA (939bp) protein (313aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00037B728E rbh
Transcriptional regulator MarR {ECO:0000313|EMBL:GAN82182.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella
putative N-acetyltransferase
Displaying items 271-300 of 577 in total

View Taxonomy