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scnpilot_p_inoc_scaffold_80_25

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 33766..34239

Top 3 Functional Annotations

Value Algorithm Source
Chemotaxis protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z3T8_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 71.0
  • Coverage: 155.0
  • Bit_score: 203
  • Evalue 1.20e-49
Chemotaxis protein {ECO:0000313|EMBL:EGD60738.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium n similarity UNIPROT
DB: UniProtKB
  • Identity: 71.0
  • Coverage: 155.0
  • Bit_score: 203
  • Evalue 1.70e-49
Positive regulator of CheA protein activity (CheW) similarity KEGG
DB: KEGG
  • Identity: 49.7
  • Coverage: 151.0
  • Bit_score: 157
  • Evalue 2.80e-36

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Taxonomy

Novosphingobium nitrogenifigens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 474
ATGAGCATTCCCGAGCGTGTTTTGACCTTTGCGCTGGATGGCGAAATCTTTGCCATTGATGCGCAGGCGGTGCGCGAGATCCTTGAAGTGCCCGCGATCACCCGCGTGCCGGGCGCGCCCGGTTTTGCCAGCGGGCTTATCAATGTGCGCGGGGCGATTGTGCCTTTGACCGATCTGGCCGTGGCCTTTGGCATGGCGCACGCCGATCATGGCGAGGACACGCGCGTCATCGTCATCGAGGCCGAGGTGGAGGGCGAGCCCACCACCATCGGTCTGGTCGCGGACAAGGTGCTGGATGTGGCCGCGATGGAGGGCGTGCCGGTGGAGGAAGCGCCGCCTGTAGGCATGCGCTGGCGCGCCGATTTCATCCGCGCCATCGCCCGGCCTCAGGGGCAATTCGTGATCCTGCCCGATCTCGAACTGATCTTTGCCGAAAGTCTGGCGCAATCCGCGCGCGCGGGCGCGGCGCCCTAG
PROTEIN sequence
Length: 158
MSIPERVLTFALDGEIFAIDAQAVREILEVPAITRVPGAPGFASGLINVRGAIVPLTDLAVAFGMAHADHGEDTRVIVIEAEVEGEPTTIGLVADKVLDVAAMEGVPVEEAPPVGMRWRADFIRAIARPQGQFVILPDLELIFAESLAQSARAGAAP*