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scnpilot_p_inoc_scaffold_80_35

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(47572..48249)

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Novosphingobium nitrogenifigens RepID=UPI0002EF08F5 similarity UNIREF
DB: UNIREF100
  • Identity: 62.5
  • Coverage: 224.0
  • Bit_score: 288
  • Evalue 6.90e-75
Two component transcriptional regulator {ECO:0000313|EMBL:EGD60051.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sour similarity UNIPROT
DB: UniProtKB
  • Identity: 62.1
  • Coverage: 224.0
  • Bit_score: 286
  • Evalue 2.80e-74
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 54.3
  • Coverage: 221.0
  • Bit_score: 244
  • Evalue 2.50e-62

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Taxonomy

Novosphingobium nitrogenifigens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 678
ATGACCCAGATCATGGTGGTGGAAGACGATGCCGAAGTGGCGCAGGTGATCGCCGATCGCCTGCGGGCGCAGGGCTATGACGTGCTGCACGCCACCACCGGGCGCGAGGCGCTGGCCCATACCCATGCCGCCCGTTTCGATGCAATCACGCTGGACCGGATGCTGCCTGATATGGACGGGATGGCACTGGTCGCGCGGCTGCGCGCCGAAGGGGTGACCACGCCGGTGCTGATGATTTCCTCGCTGGGCGATGTCGATCAACGCATCGCTGGCCTGCGGGCGGGCGGCGATGATTACATGGTCAAACCCTTTGCTCCCGACGAAGTGGCGATGCGGGTCGAGGTCCTGCTGCGGCGCGGACGCGACTATCCGGCCGAAGGGCGGATCACGGTCGGCCCGCTGGAAATGGATCTTATCAAGCGCAAGGTCTGGCTGCATGGCGAGCCGGTGGCCCTGCTGCAAAAGGAGTTCCGCCTGCTCGAACTTCTCGCCCGCCATCCGGGCCAGATCCTGAGCCGCCAGATGATCTTTGAACAGGTCTGGGGCTATTTCTTCGATCCGGCGGACAATCTCATCAATGTCCATATCGGCAAATTGCGGCGCAAGCTGGAAAAGCCGGGCCATGCCCCCATCATCGAAACGGTGAAGGGCGAAGGCTATCGGCTGGTGGTGGGCTGA
PROTEIN sequence
Length: 226
MTQIMVVEDDAEVAQVIADRLRAQGYDVLHATTGREALAHTHAARFDAITLDRMLPDMDGMALVARLRAEGVTTPVLMISSLGDVDQRIAGLRAGGDDYMVKPFAPDEVAMRVEVLLRRGRDYPAEGRITVGPLEMDLIKRKVWLHGEPVALLQKEFRLLELLARHPGQILSRQMIFEQVWGYFFDPADNLINVHIGKLRRKLEKPGHAPIIETVKGEGYRLVVG*