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scnpilot_p_inoc_scaffold_80_47

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(63096..64550)

Top 3 Functional Annotations

Value Algorithm Source
penicillin-binding protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC3A6 similarity UNIREF
DB: UNIREF100
  • Identity: 45.4
  • Coverage: 471.0
  • Bit_score: 354
  • Evalue 1.30e-94
  • rbh
penicillin-binding protein similarity KEGG
DB: KEGG
  • Identity: 43.5
  • Coverage: 494.0
  • Bit_score: 358
  • Evalue 4.30e-96
Penicillin-binding protein {ECO:0000313|EMBL:AJP73053.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomona similarity UNIPROT
DB: UniProtKB
  • Identity: 43.5
  • Coverage: 494.0
  • Bit_score: 358
  • Evalue 2.10e-95

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1455
ATGCGCCTGACCAAGACCGGGCTTGCCACGATGGCGGCGCTTTGGGCCTTTTCCGTTCCTGCTTTTGCCGCCGATCTTGAAACCCAGATCCGCGCCGTTCTGAACAAACCGGCCATTGAGGGCACCCGCTGGGGCCTGCGGGTGGAGGACAAGGAAGGCCATGTCATCGCCTCCATCGCGCCCGATGAGAGGTTTCAGCCTGCGTCCAACACCAAGGTCTTTGTCACCACCGCCGTGTTTGACGCGATGGCGCGCGCGCCTTTTCCCAATATGGGCAATGGCGTGCGGATCGAAAGCGATCATGGCCGCCAGAACATCGCGCTGATCGGACGCGGCGATGCGATGATGAAGGACACGCCCGATTGCGAAAAGGACTGCCTTGCCGCTCTGGCCGATGCGGTGGCAGCGAGCGGGGTGAAACGCGTGGGCGATGTGATCGGCGATGACAGCTTCATGCCCTTTGAACGCTGGATCATCTCCGACCGCATCCGCCCCGGCACGCGCACCCAGATTTCCGCGCTGACGATCAATGACAATGAGCTGACCGTGCTGGCCAATCCGGGCGATGCGGTGGGCGCGCCGGGCCGCGCCGCGCTGGAAATCGCCGCGCCCGAGATGGAGATCGTCAACCAGATCACGACCGGCGCGCCCGATTCCCGCGCCGAAGTCATGGTCGAAATGATCCCCGGCACACGCCAGATCCGCCTGTTCGGCTCGCTGCCCCTTGGCGGCAAAGAACAAAGGCTGGATTTCGACATTGACGATCCGGCGGATTATGCCGCGATCCGTCTGACCCAATTGCTGCGCGAGCGTGGCGTGAAAGTGACCGGCCATCCTCGTGCGCGCCATGCGCCGATGGGGCCGGTGGACATGATCCCCGCGCCGGTCGCGCCCGCCATTCAGGCCAAGGATCTCTCCACCCTCACCCCGCCCGATCTGATCGAGGATCTGACTATTACCTCGAAGGTCAGCCAGAACCTGCACGCCCATCTGTTTCTGAAGAAACTGGCGTTGACGCAGGGCTTTTCACCCACCACGCCCGCCGGGCGGATCGTGCTGAACCAGACGATTGCGCGGGCCGGTCTGCCCGCCTCTGCTCATGATTTCTACGATGGTTCGGGCCTCTCGCCCGACAATCGCATCACCCCGCGCGCGATGGTGCAATATCTCCATTGGGTCGAAACCCAGCCTTGGGCGGCGGACTGGCGCAAGACCCTGCCCATCGGCGGGGTGGACGGCACGCTGGGCCGCCGGATGAAAAATCCCGTGCTGCAAGGCAAGGTCTTTGCCAAGACCGGCACCTTGCTGGCGGCCAATGCGCTGGCGGGTTATCTGGTGGCGGCCAGCGGGCGCGAGCTGACCTTTGCCATTTATGCCAATGACCGGCCCTCGGGAGCGCCCTCGGTTCTGCCCACGATGGACGAGGCGCTGGCGCTGATCGCGGCGGCCAACTAA
PROTEIN sequence
Length: 485
MRLTKTGLATMAALWAFSVPAFAADLETQIRAVLNKPAIEGTRWGLRVEDKEGHVIASIAPDERFQPASNTKVFVTTAVFDAMARAPFPNMGNGVRIESDHGRQNIALIGRGDAMMKDTPDCEKDCLAALADAVAASGVKRVGDVIGDDSFMPFERWIISDRIRPGTRTQISALTINDNELTVLANPGDAVGAPGRAALEIAAPEMEIVNQITTGAPDSRAEVMVEMIPGTRQIRLFGSLPLGGKEQRLDFDIDDPADYAAIRLTQLLRERGVKVTGHPRARHAPMGPVDMIPAPVAPAIQAKDLSTLTPPDLIEDLTITSKVSQNLHAHLFLKKLALTQGFSPTTPAGRIVLNQTIARAGLPASAHDFYDGSGLSPDNRITPRAMVQYLHWVETQPWAADWRKTLPIGGVDGTLGRRMKNPVLQGKVFAKTGTLLAANALAGYLVAASGRELTFAIYANDRPSGAPSVLPTMDEALALIAAAN*