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scnpilot_p_inoc_scaffold_80_88

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(109461..110429)

Top 3 Functional Annotations

Value Algorithm Source
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate similarity UNIPROT
DB: UniProtKB
  • Identity: 63.7
  • Coverage: 322.0
  • Bit_score: 390
  • Evalue 2.60e-105
tRNA delta(2)-isopentenylpyrophosphate transferase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B37CFE similarity UNIREF
DB: UNIREF100
  • Identity: 62.9
  • Coverage: 326.0
  • Bit_score: 397
  • Evalue 1.20e-107
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase similarity KEGG
DB: KEGG
  • Identity: 62.1
  • Coverage: 306.0
  • Bit_score: 385
  • Evalue 1.30e-104

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Taxonomy

Novosphingobium sp. Rr 2-17 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 969
ATGAGCACCGAAATATCCCTTCATTCCTCGACAGGCCCGTCAGCCCGCCCTTTGGTCGGCCTCATTGCAGGCCCGACCGCCAGCGGCAAGAGCGATATTGCCATGGGCCTTGCGCGCGCGCTGGAAAAATCCGGGCGGGGCGCGGCCATCGTCAATGCCGACAGCGCGCAGCTTTATGCCGACCTGCCGGTTCTCTCGGCGGCGCCCTCGGCGCAGGAGCAGGCGGAAATCCCCCACCGCCTCTATGGCGCATGGGATGGGGCGCAGAGCTGCTCGGCCGCCGATTGGGCGGCGCGGGCGCGCGAGGAGATCGCAGCGGCCCATGATGCCGGGATCACGCCGATTCTTGTCGGCGGCACCGGGCTTTATCTACGCACGCTGCTCTATGGCATCGCGCCCGTGCCCGAAATCGCGCCCGAAGTGCGCGAGGCGGTGCGCGCCATGCCTGTGGGCGAGGCGCACGAAGAACTGAGCCGCCTTGACCCCGAACGGGCCGCCACCTTGCACGCCAACGACACCACCCGCGTCCATCGCGCGCTGGAGGTCGTCCGCTCAACCGGCCAGACGCTGGCCCATTGGCAGCAAAGGCTGGAGGGCGGGATTGGCGAAACGATCCGGCTGGCCCCGCTGATCCTGCTGCCCGACCGCGACTGGCTTTATGAGCGCTGCGACCGGCGCTTTGGGCTGATGGTAGAGCAAGGCGCGCTGGCCGAGGTCGAGGCGCTGGTTGCGCGCGGGCTGGACCCGGCGCTGCCGGTGATGCGGGCGATCGGGGTTTCCTCGCTGGCGGCGCATCTGCGTGGAGACATGTCGCTGGACGAAGCGATCGCCGATGGCGCGCAGGCCACGCGCCAATATGCCAAGCGCCAATATACCTGGTTTCGCCACCAGCCACCGGCCGACTGGCCACGCGCAGGCGAAACAAATGTCGCCCTAAAAACTCATTTTGATATTTTATTTCACGATTAA
PROTEIN sequence
Length: 323
MSTEISLHSSTGPSARPLVGLIAGPTASGKSDIAMGLARALEKSGRGAAIVNADSAQLYADLPVLSAAPSAQEQAEIPHRLYGAWDGAQSCSAADWAARAREEIAAAHDAGITPILVGGTGLYLRTLLYGIAPVPEIAPEVREAVRAMPVGEAHEELSRLDPERAATLHANDTTRVHRALEVVRSTGQTLAHWQQRLEGGIGETIRLAPLILLPDRDWLYERCDRRFGLMVEQGALAEVEALVARGLDPALPVMRAIGVSSLAAHLRGDMSLDEAIADGAQATRQYAKRQYTWFRHQPPADWPRAGETNVALKTHFDILFHD*