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scnpilot_p_inoc_scaffold_80_243

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 266842..267561

Top 3 Functional Annotations

Value Algorithm Source
HupC protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z428_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 71.2
  • Coverage: 236.0
  • Bit_score: 373
  • Evalue 1.30e-100
  • rbh
HupC protein {ECO:0000313|EMBL:EGD60640.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitroge similarity UNIPROT
DB: UniProtKB
  • Identity: 71.2
  • Coverage: 236.0
  • Bit_score: 373
  • Evalue 1.90e-100
Ni/Fe-hydrogenase, b-type cytochrome subunit similarity KEGG
DB: KEGG
  • Identity: 61.4
  • Coverage: 228.0
  • Bit_score: 304
  • Evalue 3.60e-80

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Taxonomy

Novosphingobium nitrogenifigens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 720
ATGGCCAGCACACCCATCGACCCGCCATTAGCCGTTGAGCCAGCGGTCTATGTCTATGAAGCGCCGGTGCGCATCTGGCACTGGATCAATGCGCTTGCCGTCACGGTGCTGTTCGTCACCGGCTATCTGATCGGTTCACCGCCCTTCACGCTGATGGGCGAGGCTTCCAGCCATTTCTTCTTCGGCTGGGTCCGCTTTCTCCATTTCAGCGCGGGCCAGATCATGGCGGTGGGCTTTGTCCTGCGCTTCTACTGGAGCTTTGTGGGCAACCATCATGCGCGCGAGATCTTCCGTCCGCCTTTCTGGCATATCGGCTTCTGGAAAGGCGTGCTGCATGAAATGCGCTGGTATGCGATGATCGAGGAGCATCCGCGCAAATATATCGGCCACAATCCGCTGGCGATGGTGTCCATGCATATCCTGTTCGTCTGGGTGGGCCTGTTCATGATCGTCACCGGCTTTGCCCTTTATGGCGAGGGCGAGGGGCCGGGCTGGATCCACACGGTCTTTACCGGGCCGGTGCTGTGGCTGTTCGGCGGCAATTCACAGACCGTGCACACCTGGCACCATCTGGCGATGTGGGCGATGGTGATCTTTGTGATCGTCCATATCTATGCCGCCGTGCGCGAGGATATCATGTCGCGCCAGTCGATCATTTCCTCGATGATCTCGGGCTGGCGCAATTTCCGCGATGCCAAGCCGATTGACCGCGATACCTGA
PROTEIN sequence
Length: 240
MASTPIDPPLAVEPAVYVYEAPVRIWHWINALAVTVLFVTGYLIGSPPFTLMGEASSHFFFGWVRFLHFSAGQIMAVGFVLRFYWSFVGNHHAREIFRPPFWHIGFWKGVLHEMRWYAMIEEHPRKYIGHNPLAMVSMHILFVWVGLFMIVTGFALYGEGEGPGWIHTVFTGPVLWLFGGNSQTVHTWHHLAMWAMVIFVIVHIYAAVREDIMSRQSIISSMISGWRNFRDAKPIDRDT*