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scnpilot_p_inoc_scaffold_80_245

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 268504..268815

Top 3 Functional Annotations

Value Algorithm Source
hydrogenase n=1 Tax=Novosphingobium nitrogenifigens RepID=UPI00037A8712 similarity UNIREF
DB: UNIREF100
  • Identity: 73.0
  • Coverage: 100.0
  • Bit_score: 148
  • Evalue 3.00e-33
Hydrogenase expression/formation protein (HUPF/HYPC) {ECO:0000313|EMBL:EGD60637.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphing similarity UNIPROT
DB: UniProtKB
  • Identity: 71.4
  • Coverage: 98.0
  • Bit_score: 142
  • Evalue 3.90e-31
hupF; putative hydrogenase expression/formation protein hupF similarity KEGG
DB: KEGG
  • Identity: 53.4
  • Coverage: 103.0
  • Bit_score: 103
  • Evalue 4.10e-20

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Taxonomy

Novosphingobium nitrogenifigens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 312
ATGTGCGTTGGCCTGCCCATGCGCGTGGTGGAAGGCGGCGCGGGTTTTGCGCTGTGCAGCCATGATGGCGCGATCCATTCCATCGACACCGCGCTGGTGGGCGAATGCGCGCCGGGCGAATGGCTGATGACCTTTCTTGGCGCCGCGCGCGAAAAGATGGACGAGGAAACCGCGCTGCAGACGCTGGCCGCCACCGATGCGCTGGCGGCGCTGCTGCGCGGCGAGGCGGTCGATCTGGACGCCGCCTTTGCCGATCTGATTGCGCGCGAACCGCAATTGCCAGACCACCTTTTGTCGGAGAACAGCCTGTGA
PROTEIN sequence
Length: 104
MCVGLPMRVVEGGAGFALCSHDGAIHSIDTALVGECAPGEWLMTFLGAAREKMDEETALQTLAATDALAALLRGEAVDLDAAFADLIAREPQLPDHLLSENSL*