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scnpilot_p_inoc_scaffold_80_250

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 270803..271519

Top 3 Functional Annotations

Value Algorithm Source
Ni,Fe-hydrogenase I large subunit n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z420_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 49.6
  • Coverage: 264.0
  • Bit_score: 244
  • Evalue 1.20e-61
Ni,Fe-hydrogenase I large subunit {ECO:0000313|EMBL:EGD60632.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="No similarity UNIPROT
DB: UniProtKB
  • Identity: 49.8
  • Coverage: 261.0
  • Bit_score: 243
  • Evalue 2.90e-61
hupK; putative hydrogenase expression/formation protein HupK similarity KEGG
DB: KEGG
  • Identity: 30.8
  • Coverage: 240.0
  • Bit_score: 69
  • Evalue 1.10e-09

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Taxonomy

Novosphingobium nitrogenifigens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 717
GTGACCGGCCCGGCCATCCGTATCGCCATAACACCCGGCGGGGGCCGGATCGTCCATTGCGCGATTCCCAATGCGCAAGGCCTGCTGATCGGCCTGCCCGCCATCAAGGTGGGGCAGGCGCTCCGCCGGTTGCACGGCATTTGCCGCGAGGCGCAGGGGCTGGCGGGCGAGTTGGCCGTGGCGGCGGCGATGGGGGAAGCCATTGCGCAGGAAGAGCTGGACCGACGCATCGCGCGCGTCCACGCCGAGGCGCGGCGCGAAACAGGCCTGCGCCTCTGCCTTGACTGGGCCGTGCTGATCGGCGAGCGCCCGCAGACCGAGCTGGCGCGCGCGGTGATCGCGGGCGACTGGAGCGTGGTGGAGGCGTCTGGTCTGGCCGAGAGGTTTCTGGCCCGGGCGCCCGAGGCCTTGCGTCCGATCTTTGCCGCGCGGCTGGCTGGAGCGCCGGTCGCACCTGACATGCATGCACCCGAACCGGGCGTGGGCGTGGCCGGGCTGACCTGCGCGAGGGGGCGGCTGATACACCGCGCGGCGCTTCACAAGGGGCGGGTGGCGGCCTACACCATTGACGCCCCCACCGCGCGCCGGTTCGGCCCGGATGGCGATGCGGCGGCGCTCTTGGCGCAATGCCACGGGGCAGAGGAGGCGGCATGGGTGATGCAGGCCATCGACCCCTGCGTTGAATGGGCAATGGATACGGCGATGGAGGCGGCCTGA
PROTEIN sequence
Length: 239
VTGPAIRIAITPGGGRIVHCAIPNAQGLLIGLPAIKVGQALRRLHGICREAQGLAGELAVAAAMGEAIAQEELDRRIARVHAEARRETGLRLCLDWAVLIGERPQTELARAVIAGDWSVVEASGLAERFLARAPEALRPIFAARLAGAPVAPDMHAPEPGVGVAGLTCARGRLIHRAALHKGRVAAYTIDAPTARRFGPDGDAAALLAQCHGAEEAAWVMQAIDPCVEWAMDTAMEAA*