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scnpilot_p_inoc_scaffold_80_257

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 275179..276666

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix, Fis-type protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z413_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 87.3
  • Coverage: 489.0
  • Bit_score: 841
  • Evalue 3.50e-241
  • rbh
Helix-turn-helix, Fis-type protein {ECO:0000313|EMBL:EGD60625.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="N similarity UNIPROT
DB: UniProtKB
  • Identity: 87.3
  • Coverage: 489.0
  • Bit_score: 841
  • Evalue 5.00e-241
two component sigma-54 specific Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 65.3
  • Coverage: 487.0
  • Bit_score: 641
  • Evalue 1.50e-181

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Taxonomy

Novosphingobium nitrogenifigens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1488
ATGACGCAATCCGGCCTGCCCACCATCCTTATCGTCGATGACGAGATCCGCAGCCTTGAATCGCTGCGCCGCATTCTCGAGGATGAGTTCGAGATCCTGACGGCCTCCTCCACGCGCGAGGCCGAGGAGATGCTGTCCCAGCATTGGGTGCAGGTGATCCTGTGCGATCAGCGTATGCCCGAGCGCAGTGGGGTGGAGTTCCTGACGCTGGTCAAGGAGCGCTGGCCCGATGTGATCCGCATGATCATCTCAGGCTATGCCGATGCGCATGACATTATCGACGGCATCAATCAGGCGGGCATTTTCCAATATGTGACCAAGCCCTGGCATCCCGACCACCTGCTGCTGACGCTGCATTCGGCCTGCCGCCTGTTTCAGCTTCAGCGCGAGAATGAATTGCTGGCGGTGGAATTGCGCATGGCTCCAAAGGCCGCCAGCGCCGTGGTGGACAAGCGCAAGGCGCAGGTGCGCCGCGCCTATGATTTCAATGACGGCATTGTGCGCAGCGCAGGCAGCCCGATGGATGATGTCTGCGGCGCGCTGGCGCAGGTAGCGCCGTTTGATGTGCCGGTTCTGTTGATCGGTTCATCGGGCACGGGCAAGGAACTGGCGGCGCGGGCTTTGCATTATGGCTCGCTGCGCTGGAACAAGGCGTTTGTGGTGGAAAATTGCGGCGCGCTGCCCGACGAATTGCTGGAAAGCGAATTGTTCGGCCATAAAAAGGGCGCCTTCACCGGGGCGATCGACGACCATATCGGCCTGTTCGAACGCGCCGATGGCGGCACGGTGTTCCTCGACGAAATCGGCGAGGTCAGCCCCGCCTTTCAGGTCAAATTGCTGCGCGTTTTGCAGGAAGGCGAGATCCGCCCGCTGGGCCATGGGCGCACGCGCAAGGTGGATGTGCGCATTATCGCGGCCACCAACCGCGATCTTGAACAGGAAATGCGCGAGGGTCGGTTCCGCGCCGATCTGTTCTATCGGCTGGCGGGCATGATCGTGCGCCTGCCCGATCTGAAGGACCGCCCCGGCGATCTGCCCGTGCTGGTGCAGACCTTGCTGGACCGGGCTATGGGCAGCATGGGCAAGCGGGTGCAGGGGGTTTCTGACGAGGCGATGGCGCGCCTGTCGGCCTATGGTTGGCCCGGCAATGTCCGCGAGCTTCAGAACGAGATCCAGCGCATGTTGGTGCGCGGGGTGGAGGGGCGCTGGCTGGGGGTGGATGTGCTATCGCCCCATATCGCCGCGCCCGCCGTGCGCGAGGTGGCCGCGCAGGAACCCATGCCCGATCTGGGCGACCTGACGGGTGATCTGAAGGAGCGTGTTTGCGCGATGGAGGCCCGGATCATCCGCGAAACGCTGATCCGCCACCGCTGGAACAAATCGCAGGCGGCGCGCGAACTGGGCCTGTCGCGGGTGGGCCTGCGGGCGAAACTCGAACGCTATGGGCTGGAAAACGTCCATCCGCTGCGGGGAGTGGCGGGCCGATGA
PROTEIN sequence
Length: 496
MTQSGLPTILIVDDEIRSLESLRRILEDEFEILTASSTREAEEMLSQHWVQVILCDQRMPERSGVEFLTLVKERWPDVIRMIISGYADAHDIIDGINQAGIFQYVTKPWHPDHLLLTLHSACRLFQLQRENELLAVELRMAPKAASAVVDKRKAQVRRAYDFNDGIVRSAGSPMDDVCGALAQVAPFDVPVLLIGSSGTGKELAARALHYGSLRWNKAFVVENCGALPDELLESELFGHKKGAFTGAIDDHIGLFERADGGTVFLDEIGEVSPAFQVKLLRVLQEGEIRPLGHGRTRKVDVRIIAATNRDLEQEMREGRFRADLFYRLAGMIVRLPDLKDRPGDLPVLVQTLLDRAMGSMGKRVQGVSDEAMARLSAYGWPGNVRELQNEIQRMLVRGVEGRWLGVDVLSPHIAAPAVREVAAQEPMPDLGDLTGDLKERVCAMEARIIRETLIRHRWNKSQAARELGLSRVGLRAKLERYGLENVHPLRGVAGR*