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scnpilot_p_inoc_scaffold_80_347

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 377715..378254

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0IZA1_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 66.9
  • Coverage: 178.0
  • Bit_score: 244
  • Evalue 9.10e-62
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:GAO53281.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium. similarity UNIPROT
DB: UniProtKB
  • Identity: 71.3
  • Coverage: 178.0
  • Bit_score: 255
  • Evalue 7.20e-65
RNA polymerase similarity KEGG
DB: KEGG
  • Identity: 48.3
  • Coverage: 174.0
  • Bit_score: 161
  • Evalue 2.80e-37

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 540
ATGCAACCGGGTGAAGAGGCGTTGAAACAGTGGATGGTGATGGGCCTTGCCGGTGACAGCGCCGCCCATGGGCAATTGCTGCGCGCGCTGGTGCCGATTTTGCGAGGTTTCTATCGCCGCCGCATGGGCGCGCAGGAGGATGAGATCGAGGACCTGTTGCAGGAGACGCTGATCGCGGTCCACACCCGCCGCGCGACCTATGATGTGGCGCGGCCCTTCACCAGTTGGCTCTTTGCCGTGGCGCGTTACAAGATGATCGACCATTTCCGTCAAGGCGGGCGCACCTGCACCATTGAGGGGCTGGAGGATATTCTTGCCGTCGAGGGCTTTGCCGAGGCCAGCGATGCCGTCGCCGATGTCGAGCGCTTGCTGGAAACGATCCCCAAAAAACAGGCCGCCGCCATCCGCGCCACGCGGATCGACGGGCTTTCCACCGCCGAGGCCGCGACAAAACTTGATCTGGGCGAATCCGATATCAAGGTTTCCGTGCATCGCGGGCTCAAGGCTCTGGCGCAGCGGGTCAAGGACAGTTTGCTATGA
PROTEIN sequence
Length: 180
MQPGEEALKQWMVMGLAGDSAAHGQLLRALVPILRGFYRRRMGAQEDEIEDLLQETLIAVHTRRATYDVARPFTSWLFAVARYKMIDHFRQGGRTCTIEGLEDILAVEGFAEASDAVADVERLLETIPKKQAAAIRATRIDGLSTAEAATKLDLGESDIKVSVHRGLKALAQRVKDSLL*