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scnpilot_p_inoc_scaffold_80_440

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(451633..452082)

Top 3 Functional Annotations

Value Algorithm Source
transcription antitermination protein NusB n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B46C89 similarity UNIREF
DB: UNIREF100
  • Identity: 70.8
  • Coverage: 144.0
  • Bit_score: 202
  • Evalue 2.50e-49
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=983920 species="Bacteria; Prote similarity UNIPROT
DB: UniProtKB
  • Identity: 67.8
  • Coverage: 149.0
  • Bit_score: 201
  • Evalue 7.90e-49
nusB; antitermination protein NusB similarity KEGG
DB: KEGG
  • Identity: 68.7
  • Coverage: 147.0
  • Bit_score: 197
  • Evalue 3.00e-48

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Taxonomy

Novosphingobium nitrogenifigens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 450
ATGAGCAAAGCTCCCAAGTCCCAGTCCCGCTCGGTCGCCCGCCTTGGCGCGGTGCAGGCGCTGTATCAGCATGCGATGGAAGGCACGCTGCTGCCGGTGCTGCTTGATGAATTCCACCGCCACCGTCTGGGCGCGGAAATCGAGGACATCCAGTTTGCCGATGCCGACCGCATCCATTTCGACGATGTGGTCAAGGGCGTGCTGGCGCGGGCCGAGGAAATCGACGCGCGCATATCCGAAAAACTGGCCGAGGGCTGGCGGCTGGAGCGTCTGGACAAGACCATGGTGCAGATCCTGCGCGCGGGCACCTATGAGCTGCTGGCTCGCGACGATGTGGCCGCGCCCACGGTCATCAACGAATATGTCGATGTGGCCCATGCCTTCTTTGACGAGCGCGAAGCCAAATTCGTGAACGGCGTGCTCGACGCCATCGCGCGGGCGGCGCGTTAA
PROTEIN sequence
Length: 150
MSKAPKSQSRSVARLGAVQALYQHAMEGTLLPVLLDEFHRHRLGAEIEDIQFADADRIHFDDVVKGVLARAEEIDARISEKLAEGWRLERLDKTMVQILRAGTYELLARDDVAAPTVINEYVDVAHAFFDEREAKFVNGVLDAIARAAR*