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scnpilot_p_inoc_scaffold_80_457

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(463633..464379)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy similarity UNIPROT
DB: UniProtKB
  • Identity: 75.0
  • Coverage: 248.0
  • Bit_score: 387
  • Evalue 1.30e-104
tRNA pseudouridine synthase A n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EIB1_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 75.0
  • Coverage: 248.0
  • Bit_score: 387
  • Evalue 9.20e-105
pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 75.0
  • Coverage: 248.0
  • Bit_score: 387
  • Evalue 2.60e-105

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Taxonomy

Novosphingobium pentaromativorans → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 747
ATGACCCGTTTCGCCTTTACGCTGGAATTTGACGGCACGCCCTTCATGGGCCTGCAGCGGCAAGCGCATGGCCCCAGCATCCAGCAGGCCGTCGAGGAAGCTATCGAACGCGTCACCGGCGAGCAGGCCGTGATGTTTGCCGCCGGGCGCACCGATGCCGGGGTCCACGCGCTGTTCATGCGCGCCCATGTCGATATTCAAAAGGACATCGCCCCCTTCCGCCTGATGGAGGCGATGAATTATCATCTGCGTCCCAACCCGATCGCGGTGCTGGATTGCAGGGTCGTGGCTGATGACTGGCATGCGCGCTTTTCCTGCATCGGGCGCAGCTATATCTATCGCATCGTCAACCGCCGCGCGCCGTTGACCATCGGACTGAACCATGCGTGGCAGGTGGCCAAACCGCTGGACGCCGAGGCGATGCATGAGGCCGCGCAGGCGCTGGTTGGCCACCATGATTTCACCACTTTCCGCTCGGTCCATTGTCAGGCCGCCTCCCCCCTTAAGACGCTCGACAGCCTGACCGTGCGGCGGCAGGGCGATCAAGTGATCATCGAAACGGCAGCGCGGAGCTACCTCCACCATCAGGTGCGATCGATGGTCGGGGCGCTGTCGGTGGTCGGGCTGGGCCGCTGGCCGGTGGAGCGGGTGCGCGAAGCGCTGGAGGCGCGGGATCGACAGGCCTTGCCGGTGAATGCGCCTCCTGATGGGCTGTTTTTCAACCGGGCGTTTTATCAGGGGGAATAG
PROTEIN sequence
Length: 249
MTRFAFTLEFDGTPFMGLQRQAHGPSIQQAVEEAIERVTGEQAVMFAAGRTDAGVHALFMRAHVDIQKDIAPFRLMEAMNYHLRPNPIAVLDCRVVADDWHARFSCIGRSYIYRIVNRRAPLTIGLNHAWQVAKPLDAEAMHEAAQALVGHHDFTTFRSVHCQAASPLKTLDSLTVRRQGDQVIIETAARSYLHHQVRSMVGALSVVGLGRWPVERVREALEARDRQALPVNAPPDGLFFNRAFYQGE*