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scnpilot_p_inoc_scaffold_80_460

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 466040..466609

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS0 similarity UNIPROT
DB: UniProtKB
  • Identity: 83.6
  • Coverage: 189.0
  • Bit_score: 334
  • Evalue 7.50e-89
Peptide deformylase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A048_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 82.5
  • Coverage: 189.0
  • Bit_score: 331
  • Evalue 4.60e-88
  • rbh
peptide deformylase similarity KEGG
DB: KEGG
  • Identity: 83.1
  • Coverage: 189.0
  • Bit_score: 329
  • Evalue 4.90e-88

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 570
ATGGCTATCCGACCGATCCTCGAAGCGCCCGATGCGCGCCTGAAGCAGATTTCTGCCCCTGTCACCGTGTTTGACGATGAGCTCAAGGTGCTCGTCGCCGATATGTACGAGACGATGTATGACGCGCCGGGCATTGGCCTGGCTGCTATTCAGGTGGGCGTGCCGCTGCGTGTGGTGGTGGTCGATCTTCAGCCCGAAGATCCCGATGCCGAACCCGAAGTCTGCACCTCGCATGGCGGGCATGAGCATACGCATCAGCCGGTGAAGCGCGAGCCGCGCACCTTTATCAACCCGGAAATCCTTGATCCTTCGGAAGAACATTCGGTCTATCAGGAAGGCTGCCTGTCGGTCCCCGATATTTATGCCGAGGTCGAGCGCCCCGCCACCTGCCGCCTGCGTTGGCAGGATGTCGACGGCAATGTGCATGAGGAGGCGATGGAAGGCCTGATGGCCACCTGCATCCAGCATGAGATCGATCACCTCGAAGGCATCCTGTTTATCGACCACCTTTCGCGGCTGAAGCGCAATATGGCGCTCAAGAAGCTGGAAAAGGCGCGCAAGCTGGCTTGA
PROTEIN sequence
Length: 190
MAIRPILEAPDARLKQISAPVTVFDDELKVLVADMYETMYDAPGIGLAAIQVGVPLRVVVVDLQPEDPDAEPEVCTSHGGHEHTHQPVKREPRTFINPEILDPSEEHSVYQEGCLSVPDIYAEVERPATCRLRWQDVDGNVHEEAMEGLMATCIQHEIDHLEGILFIDHLSRLKRNMALKKLEKARKLA*