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scnpilot_p_inoc_scaffold_238_16

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(16639..17052)

Top 3 Functional Annotations

Value Algorithm Source
Alpha-subunit of protocatechuate 4,5-dioxygenase n=1 Tax=Sphingomonas sp. KA1 RepID=Q0KJL0_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 69.4
  • Coverage: 124.0
  • Bit_score: 175
  • Evalue 5.20e-41
Alpha-subunit of protocatechuate 4,5-dioxygenase {ECO:0000313|EMBL:BAF03332.1}; TaxID=164608 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.; similarity UNIPROT
DB: UniProtKB
  • Identity: 69.4
  • Coverage: 124.0
  • Bit_score: 175
  • Evalue 7.20e-41
protocatechuate 4,5-dioxygenase subunit alpha similarity KEGG
DB: KEGG
  • Identity: 73.6
  • Coverage: 110.0
  • Bit_score: 164
  • Evalue 2.60e-38

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Taxonomy

Sphingomonas sp. KA1 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 414
ATGTCTGGACCGCAAAATGTGAGCGAGCCGATTCCGGGCACCCATCTGTTCGATGGCGATGCTGCGGCCAAGGGCTTTGAGCTCAACGCCATGTGCTATTCCTTTAACAACGCCGCCAATCGTCAGGCCTTCCTTGATGATGAGGAAGCCTATTGCGCCAAATTCCACCTCACGCCCGAGCAGCGCAAAGCCGTGGCCGAGCGCAGCGTGCTGGGCATGATCGCGGCGGGCGGCAACATCTATTACCTTGCCAAGCTGGCCGGGATTTTCGGCCTGAACGTGCAGGATGTCGGCTCGATGCAGACCGGGGTTCCGGTCGATGATTTCAAGGCGATGCTGCTGGCGCAAGGCGCGGGGCAGACCTATGACGAGGCGCATGGCGCCATGATTGGGAAGGAGAAGGTCCATGGCTGA
PROTEIN sequence
Length: 138
MSGPQNVSEPIPGTHLFDGDAAAKGFELNAMCYSFNNAANRQAFLDDEEAYCAKFHLTPEQRKAVAERSVLGMIAAGGNIYYLAKLAGIFGLNVQDVGSMQTGVPVDDFKAMLLAQGAGQTYDEAHGAMIGKEKVHG*