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scnpilot_p_inoc_scaffold_238_119

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(133218..133940)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Sphingobium sp. AP49 RepID=J2WQ23_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 73.6
  • Coverage: 239.0
  • Bit_score: 356
  • Evalue 1.70e-95
  • rbh
Transcriptional regulator {ECO:0000313|EMBL:EJK85078.1}; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium s similarity UNIPROT
DB: UniProtKB
  • Identity: 73.6
  • Coverage: 239.0
  • Bit_score: 356
  • Evalue 2.40e-95
regulatory protein TetR similarity KEGG
DB: KEGG
  • Identity: 75.5
  • Coverage: 229.0
  • Bit_score: 346
  • Evalue 4.90e-93

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Taxonomy

Sphingobium sp. AP49 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 723
ATGAACGCAACGAATGAGGGTAATGAGCGCCCCCAGACCTATGCCAGCCCCGCGATCATTGAGCGGCGGCGGCGAATTCTGGAGGAAACGCGGCAGGTGATTGCCGAGCAGGGCATCACCGCGCTCAACATGAACGACATCGGGCGGCGCGCGGGCGTGGCCAAGCGCACGCTGTACAATGCGTTTCAGACGCGCGAGCGGATGATTGCGGCCGCCATTCAGGAATATTTCGAGGAATACGTCAGCCGCATCACCTTTACCCAGCCTTCGGGCACGCTGCAGCACAATCTGGAGCGCATGATCTCGGTGGTGCAGCGCAACCGGCGCATCCCCAATTACATCCGCGCGATCATGGCGCTCTATTTCAGCCCCGAGGTGGACGAGGACATCTGGCTGGCCATGCATTCGATCGCCACGCGGCAAAACCGGGCGTGGATCGAAAATCTGGCCGCGGGCAAGCAGTTGCAGGCATGGGTCGAGGTCGATACGCTGGTCGACGATCTGGTGCGGCTGGAATATGCGATGATCAACGATTGGGCGCGCGGGCGGATTCCCGATGATGCGATCATCGTGCGGCTGATCACCTCCTATCTGACGCTGATCCTTGGCGCGGTGCGCGGGGCGGCGCGCAAGGAGGTCGAGGCGATGCTGAAGGATATTGCCGAGCGCGGATCCGAGGCATTGCCGATGCGCAAGCGGGCCAAGGCGGAGGCGGCGGAGTAA
PROTEIN sequence
Length: 241
MNATNEGNERPQTYASPAIIERRRRILEETRQVIAEQGITALNMNDIGRRAGVAKRTLYNAFQTRERMIAAAIQEYFEEYVSRITFTQPSGTLQHNLERMISVVQRNRRIPNYIRAIMALYFSPEVDEDIWLAMHSIATRQNRAWIENLAAGKQLQAWVEVDTLVDDLVRLEYAMINDWARGRIPDDAIIVRLITSYLTLILGAVRGAARKEVEAMLKDIAERGSEALPMRKRAKAEAAE*