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scnpilot_p_inoc_scaffold_469_6

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(2941..3201)

Top 3 Functional Annotations

Value Algorithm Source
Transporter n=1 Tax=Sphingobium baderi LL03 RepID=T0H0A4_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 98.8
  • Coverage: 85.0
  • Bit_score: 166
  • Evalue 1.20e-38
Transporter {ECO:0000313|EMBL:EQB05563.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.8
  • Coverage: 85.0
  • Bit_score: 166
  • Evalue 1.60e-38
CzcC family heavy metal RND efflux outer membrane protein similarity KEGG
DB: KEGG
  • Identity: 62.4
  • Coverage: 85.0
  • Bit_score: 104
  • Evalue 1.20e-20

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Taxonomy

Sphingobium baderi → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 261
ATGCGATTGTTTGTTTGTCTGCCGCTGCTCGCGGCGATCCCCGGCGTTGCATTCGCTGGTCCCCTCACTTTCGACGCTGCGCTCCAGCGCGCGCGGCAGGAAGCGCCGTCGATCAAGGCCAAGGCGCTCGCCGCCGAGGCCGCTCGTTCCGCTCGTGGCGGCGCCGGATCGCTACCTGATCCGACTCTGGCCGTTGGGCTCGACAGTTTCCCGATCTCGGGGCCATTGGCGTTTGCTCCCGGGCAGGACAATTTGGGGTGA
PROTEIN sequence
Length: 87
MRLFVCLPLLAAIPGVAFAGPLTFDAALQRARQEAPSIKAKALAAEAARSARGGAGSLPDPTLAVGLDSFPISGPLAFAPGQDNLG*