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scnpilot_p_inoc_scaffold_530_20

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(18254..19030)

Top 3 Functional Annotations

Value Algorithm Source
short-chain dehydrogenase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B64283 similarity UNIREF
DB: UNIREF100
  • Identity: 88.4
  • Coverage: 258.0
  • Bit_score: 456
  • Evalue 2.20e-125
  • rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:KHS44972.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sourc similarity UNIPROT
DB: UniProtKB
  • Identity: 72.3
  • Coverage: 256.0
  • Bit_score: 380
  • Evalue 1.60e-102
short-chain dehydrogenase/reductase SDR similarity KEGG
DB: KEGG
  • Identity: 70.3
  • Coverage: 256.0
  • Bit_score: 365
  • Evalue 1.40e-98

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Taxonomy

Novosphingobium subterraneum → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 777
ATGAGCATTTCGCTGAACAATGTGGTGGCGGTGGTCACCGGCGCGCGGGGCGGGATCGGGCGTGAGGTCGTGCGCGCGATGAAGGAGGCCGGGGCAACCGTCGTGGCCACCGACATGGTGGCGCCCGGCGATGTCGGGGCCGATCACGCGCTGGCCCATGATGTCACCCATGCGGGCGACTGGCAGGCGGTGGCCGATCTGGTGGCGCGCGAATATGGTCGCCTCGATGCTCTGGTCAATGTGGCCGCGATCAGCATCGTGGCCAGCATCGAGGAAACCCCGCTGGAGGAATGGCGCCGCATCCATCAGGTCAATGTCGAAAGCGTGATCGTGGGCGTGCAGACCCTGCTGCCCATGCTGAAAGAGGGCGGCAAGGCGCGGGCGAGCGGCGCCTCGATCGTCAATTTTTCCAGCGTGGGCGGGATCAAGGGCGCGCCGTTCAACGGGGCCTATTGCACCAGCAAGGCGGCTGTCAAAATGCTGTCCAAATGCATGGGCGCCGAATTTGCCGCGTTGGGCTATAACATCCGCGCCAACAGCGTCCATCCCGGCGGGATCGACACGCCGATGCTGCAATCCATCATGCAGCGCTATGTCGATCTGGGCGCGGTGCCTTCGATTGAGGCTTCGATGCAGGGCGTGGTGGCGGCCCATCCCATCGGGCGGCTGGGGCGCCCTGATGAAATGGCGGGCGGGGTGGTCTATCTCTGCTCGGACGCGGCCAGCTTTGTCACATGCAGCGAGTTTATGATGGATGGCGGTTATTGCATGAGCTGA
PROTEIN sequence
Length: 259
MSISLNNVVAVVTGARGGIGREVVRAMKEAGATVVATDMVAPGDVGADHALAHDVTHAGDWQAVADLVAREYGRLDALVNVAAISIVASIEETPLEEWRRIHQVNVESVIVGVQTLLPMLKEGGKARASGASIVNFSSVGGIKGAPFNGAYCTSKAAVKMLSKCMGAEFAALGYNIRANSVHPGGIDTPMLQSIMQRYVDLGAVPSIEASMQGVVAAHPIGRLGRPDEMAGGVVYLCSDAASFVTCSEFMMDGGYCMS*