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scnpilot_p_inoc_scaffold_895_44

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 47009..48115

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein, LuxR n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V801_SPHWW similarity UNIREF
DB: UNIREF100
  • Identity: 38.1
  • Coverage: 370.0
  • Bit_score: 223
  • Evalue 3.40e-55
Transcriptional regulatory protein {ECO:0000313|EMBL:GAO53626.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source=" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.5
  • Coverage: 362.0
  • Bit_score: 324
  • Evalue 2.60e-85
regulatory protein LuxR similarity KEGG
DB: KEGG
  • Identity: 38.1
  • Coverage: 370.0
  • Bit_score: 223
  • Evalue 9.60e-56

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1107
ATGGATGATGCCGGTATTCTGGGCCATCTCTATGGCGCGGCGCATGATTCAAGGCGATTGACGATTGTGCTGGACGCCTTGCGCGCCCGCACCGGGGCGGGCAGCGTCACCATTCATTGGTTTCATCGCCGGGCAGACCGTTTGCGCCATCGCTGGATGGTCGGCTGTTCGCAGACCCCGGCCGATTTCGCCGATCTGGGCGCGATGGATGACATCAACCCGCGCACGATTGCCGCGCTCAATCCGGTGCACAGCGGGGTTGTGATGCTTGAGGACAGCCATATTCCCGATATCTTGAGCGATGAAGTGGCCGAATGGCAGAAAAAGCTGCGCAACAGCGGGCTCGGCCAGTTTATCGGCGCACGCATGACGATGGGCGAATTGGGAGAGGCCGGACTGGCCGTTCATGCGGCCCATGGCGGACAAGCGCCGGCGCAGGATTGCCGCGCGACGCTTACCTCAATGATGCCCCACGTCCGCGAAGTGCTGAAACTGTCGGTGGCAAATGCGGAGCGCGAACGGGAACGCGAGAGCATGCGTCTCCTGATTGACCAGATGCGTTTGGGCGTGTTGTTCTGCAATGCATCGGGCTGGATCATCACCGCCAATGCCATCGGGCAAAGATGGATGACGAATGCCGCTCTGGCTGCTCCTGAGCGCTGCGGCCTTGGCCAACGCGCCCGGCTGGTGACTGCGGCGCGTGGTCTGTTGCTGTCTCATGGTCCCAGTGAAATGCGCTGGACAACGCCAGCGGGGGACTGGCTGATCCGGGCCATGCCGCTTGTGCAGGACGGCTTCGATACGATCCCGCAACCTTTAGGACGGCCCAGCCATGTCATCGTTGGCTGTGATGCGGACGGTCGGGTTTCTCCCGCGCCGGGTGAGTTGCTTGCCCTGTTTGGTGTGACGCGGGTGGAGGCCGAATTGCTGGCTCATCTATGTATGGGGGAAGATCTGAGAGCCTTTGCCCAGAGCCGCGGCGTTTCGATCCACACCGCGCGAACCCAGCTCAAGCAGGTGATGGCCAAGACCCGCACCCACCGGCAAAGCGATCTGGTGCGTCTGGTGATGAACAGTCCGGTCGGCCTGTTCGGCTCGCATCACTGA
PROTEIN sequence
Length: 369
MDDAGILGHLYGAAHDSRRLTIVLDALRARTGAGSVTIHWFHRRADRLRHRWMVGCSQTPADFADLGAMDDINPRTIAALNPVHSGVVMLEDSHIPDILSDEVAEWQKKLRNSGLGQFIGARMTMGELGEAGLAVHAAHGGQAPAQDCRATLTSMMPHVREVLKLSVANAERERERESMRLLIDQMRLGVLFCNASGWIITANAIGQRWMTNAALAAPERCGLGQRARLVTAARGLLLSHGPSEMRWTTPAGDWLIRAMPLVQDGFDTIPQPLGRPSHVIVGCDADGRVSPAPGELLALFGVTRVEAELLAHLCMGEDLRAFAQSRGVSIHTARTQLKQVMAKTRTHRQSDLVRLVMNSPVGLFGSHH*