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scnpilot_p_inoc_scaffold_895_54

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 57282..58226

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B4E20A similarity UNIREF
DB: UNIREF100
  • Identity: 72.2
  • Coverage: 309.0
  • Bit_score: 447
  • Evalue 9.50e-123
  • rbh
DNA, contig: SP661 {ECO:0000313|EMBL:GAN15601.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim similarity UNIPROT
DB: UniProtKB
  • Identity: 66.8
  • Coverage: 313.0
  • Bit_score: 426
  • Evalue 4.10e-116
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 35.5
  • Coverage: 301.0
  • Bit_score: 199
  • Evalue 1.30e-48

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Taxonomy

Sphingomonas paucimobilis → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 945
ATGGACGACAAGCTTGAAACCAACAACGTCATCGCCATGATGTCTTTTGCCGAAGTGGTGAGCACCGGCAGTTTTTCGGCGGCGGCAACTTCGCTGGGCTATTCAAAGGCGGCCGTGAGCCGACAGATTTCGCGGCTTGAGACCAGCGTCGGCATGAAGCTGCTCGAGCGCAACACGCGAACGGTGACGCTGACCCCGGTGGGGCGCGAAATGTATGCGCGCTGCGCCCGGATTGTGGACGAGGTGAACGAAGCCAATCGCGTGATGACCGGGATGCAGCAAAAGCCGCGCGGCGATCTCAAGGTCAATGCGCCGGTGGTTTCCTCGCTGTTCGACCTGACCAAGATCATCCCGCGCTTTTTGCAGGCCTATTCCGATATTCGCCTGTTCATCAACCTTTCCGACAGCCGGGCAGATTTGCTCAAGGGCAGATTCGATGTCTCGTTCTGGATTGGCGAGCCTTATGACGCCAATCTTGATTCGGTGCTGCTGCGCGAATATCCGATGGTGCTGGTGGCTTCGCCGGCCTATCTCGACCGCGAGGGGCGGCCCAAGGCGGCCGGCGATCTTAAAGAGCATGTCTGCATTTCCGAAACCCACCTGTCGCAATTGGGCGAATGGCGGCTTTCCAAGGATACGACCGTGGCGATCGGGCGCGGGCCTTTGACATCGAACTCGGTGCGCATGGCGCGCGAGGCCTCGCTTCAGGATCTGGGCGTCAGCTATATGCCGCGCTTTCTGGTGGCCGATGACATTGATGCCGGAAGGTTGGAGGTGCTGCTGCCCGATCTGGTGACCGAAACAATCTCGCTCCATCTGCTCTTTCCCAAGGGAAGCTACATGCTTTCCAAGGTCCGCGCCTTTGTCGATTTCGTCGCCTCGGAAGTGCGCGAAGGTCCGGCCGCCAGTGTGGGCGGCGGTATCGCCCTGACGCAGGCCTATTAA
PROTEIN sequence
Length: 315
MDDKLETNNVIAMMSFAEVVSTGSFSAAATSLGYSKAAVSRQISRLETSVGMKLLERNTRTVTLTPVGREMYARCARIVDEVNEANRVMTGMQQKPRGDLKVNAPVVSSLFDLTKIIPRFLQAYSDIRLFINLSDSRADLLKGRFDVSFWIGEPYDANLDSVLLREYPMVLVASPAYLDREGRPKAAGDLKEHVCISETHLSQLGEWRLSKDTTVAIGRGPLTSNSVRMAREASLQDLGVSYMPRFLVADDIDAGRLEVLLPDLVTETISLHLLFPKGSYMLSKVRAFVDFVASEVREGPAASVGGGIALTQAY*