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scnpilot_p_inoc_scaffold_980_15

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 8804..9532

Top 3 Functional Annotations

Value Algorithm Source
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule similarity UNIPROT
DB: UniProtKB
  • Identity: 88.8
  • Coverage: 242.0
  • Bit_score: 423
  • Evalue 1.60e-115
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC:5.3.1.16) similarity KEGG
DB: KEGG
  • Identity: 86.2
  • Coverage: 240.0
  • Bit_score: 413
  • Evalue 4.30e-113
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Novosphingobium sp. AP12 RepID=J2ZZ91_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 88.8
  • Coverage: 242.0
  • Bit_score: 423
  • Evalue 1.10e-115

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Taxonomy

Novosphingobium sp. AP12 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 729
ATGATCGTTTTTCCCGCCATCGACCTCAAGGGTGGTCAGGTCGTCCGTCTGGCCGAGGGCGATATGGACCGCGCCACGGTCTATGGCGACAACCCGGCCGCGCAGGCGCAGATCTTTGCCGATGCGGGCAGCCAGTTCCTGCATGTGGTCGATCTGGACGGTTCGTTTGCGGGCCGGGCGGAAAACCGCGAGGCGGTTGAGGCGATCCTGCAGAGCTTTGAAGGCCATGTGCAATTGGGCGGCGGCATCCGCACGCGCGAATCGGTCGAAGGCTGGTTCAGCCTTGGCGTGTCGCGCGTAGTGATGGGCACGGCGGCGCTCAAGGACCCCGAATTCGTCAAGGACATGGCCAAGGAATTTCCGGGCGGCATCGTCGTGGCCGTGGACGCGCGCGACGGTTTCGTGGCGACGCAGGGCTGGGCCGATGTGTCGGATGTGGCCGTGGTCGATCTGGCCCGCCGGTTCGAGGATGCGGGCGTGGCCTCGCTGCTGTTTACCGACATTGGCCGGGATGGCTTGCTGAAGGGCGCCAATATCGAGGCGACCGTCGATCTGGCGCGCCGGGTGAATATTCCTGTGATTGCGTCCGGCGGGGTCAAGGGGCTGGATGATATCCGGTTGCTCGCGCTCCATGCCGAGGATGGGATTGAGGGTGTGATTACGGGTCGGGCTTTGTTCGAGGGCAAGCTCGATCTGGCCGCGGCGATTGCGATGGCGAATAAGGAGTAA
PROTEIN sequence
Length: 243
MIVFPAIDLKGGQVVRLAEGDMDRATVYGDNPAAQAQIFADAGSQFLHVVDLDGSFAGRAENREAVEAILQSFEGHVQLGGGIRTRESVEGWFSLGVSRVVMGTAALKDPEFVKDMAKEFPGGIVVAVDARDGFVATQGWADVSDVAVVDLARRFEDAGVASLLFTDIGRDGLLKGANIEATVDLARRVNIPVIASGGVKGLDDIRLLALHAEDGIEGVITGRALFEGKLDLAAAIAMANKE*