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scnpilot_p_inoc_scaffold_1397_4

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(2181..2717)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Novosphingobium nitrogenifigens RepID=UPI000367C420 similarity UNIREF
DB: UNIREF100
  • Identity: 64.5
  • Coverage: 166.0
  • Bit_score: 240
  • Evalue 1.30e-60
Conjugal transfer protein {ECO:0000313|EMBL:EGD59309.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphing similarity UNIPROT
DB: UniProtKB
  • Identity: 66.7
  • Coverage: 156.0
  • Bit_score: 231
  • Evalue 1.10e-57
type IV secretory pathway protease TraF-like protein similarity KEGG
DB: KEGG
  • Identity: 53.1
  • Coverage: 179.0
  • Bit_score: 196
  • Evalue 4.70e-48

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Taxonomy

Novosphingobium nitrogenifigens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 537
GTGTCGAGCCTCGCTGAGCCGATCTCCCTTCCGGTGAGCAGGCGCTGGCGCCGCCGGTTGCTCGCGCTGGCGCTGGTCGGCGCAAGCTTGGCCGCCTGGCAGGGGCTGCGCGACTGGAGCCGGCATCACGGCCTCTTCATCAATGCGAGCGCCTCGCTGCCCAATTGGGCCTTTCTGGTCGAGCTGGGCCGCTTTCCGGCGCGCGGCGATGTTGTGCTCTTCGACCCTGGCCGCGATCCGCTGGTCGTCCGTCATTTTGGCGCCGCACCTCGCCCCTTTGCCAAGATTGCTTACGGCCTGCCCGGGGACTTGATCACCCGGCACGGCGAGGAGGTGGCGGTCAATGGCCTACCGGTCGCGCGGCTCAAACCCTTCACAAGGCAGGGCGAGGCGCTGATCCCTGGCCCATTGGGAGTGGTCCCGCGCGGCTGTGTCTTTGCCGCGAGCCCGCACCGCGATGGCTTCGACAGCCGCTACGCTGTGATCGGCTTTGTCTGCCGCGACCGCTTGCTCGGCACCGGAAAGGCCATTCTGTGA
PROTEIN sequence
Length: 179
VSSLAEPISLPVSRRWRRRLLALALVGASLAAWQGLRDWSRHHGLFINASASLPNWAFLVELGRFPARGDVVLFDPGRDPLVVRHFGAAPRPFAKIAYGLPGDLITRHGEEVAVNGLPVARLKPFTRQGEALIPGPLGVVPRGCVFAASPHRDGFDSRYAVIGFVCRDRLLGTGKAIL*